| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG0392 |
|---|
| Symbol | |
|---|
| ID | 1013187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | + |
|---|
| Start bp | 400995 |
|---|
| End bp | 402560 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637315590 |
|---|
| Product | cell wall surface anchor family protein |
|---|
| Protein accession | NP_687426 |
|---|
| Protein GI | 22536575 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01168] Gram-positive signal peptide, YSIRK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.786642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT CACAATACAA TAAATGGTCA ATTCGCCGAT TGAAAGTTGG AGCTGCATCT
GTAATGATTG CTAGTGGAAG CATTGTTGCT TTAGGGCAAT CTCATATTGT TTCAGCAGAT
GAGATGTCCC AACCTAAAAC AACCATTACA GCTCCAACAG CTAACACTTC TACAAATGTA
GAAAGTAGTA CTGATAAGGC ATTATCAAAA GTTACTACGA TGGAGACAAG TTCAGAAATG
CCTAAAATGC AAAATATGGC AAAAGTTGAA AAAACGAGTG ACAAACCTAT GATGGTGGCT
ACCTCTGTTA GAAAAATGAT GGCAACGCCG ACACCTGTAG CGATGACCAA AACGACTAGT
GTAGATGAGG TAAAGAAATC AACTGATACT GCTTTTAAAC AGACAGTAGA CGTTCCGGCT
CATTATGTTA ATGCAGCAAA AGGGAATGGC CCATTTCTAG CAGGTGTAAA TCAAACGATT
CCATATGAAG CGTTTGGTGG AGATGGCATG TTAACGCGTT TAATCCTTAA ATCTTCTGAA
GGAGCAAAAT GGTCAGATAA TGGTGTTGAT AAAAATAGTC CATTATTACC ATTGAAAGGC
TTAACTAAAG GTAAATATTT CTATCAAGTT TCTTTAAATG GTAATACGAC AGGTAAAGAG
GGACAAGCTC TCTTAGATCA AATTAAAGCT AATGATAAAC ATAGCTACCA AGCCACAATT
AGAGTTTATG GTGCTAAAGA TGGTAAAGTT GATTTAAAAA ACATGATTAG CCCAAAAATG
GTAACCATTA ACATTCCTCA CATTACAACT GATATGGAAG TAAAAAATTC TCTAAAGATG
GCCTTTAAAG AAAAAGTAGA CGTCCCAGCA AAATATGTTA GTGCTGCAAA AGCTAAAGGT
CCATTTTTAG CAGGTGTTAA CGAAACGATT CCATATGAAG CGTTTGGTGG GGATGGCATG
TTAACGCGTT TAATCCTTAA AGCTTCAGAG GGAGCAAAAT GGTCAGACAA TGGTGTTGAT
AAAAATAGTC CATTATTACC GTTAAAAGAT TTAACTAAGG GTAAATACTT CTACCAAGTC
TCTCTTAATG GCAATACAGC CGGTAAAAAA GGCCAAGCTC TCTTAGATCA AATTAAGGCA
AATGGAAGCC ATACTTATCA AGCAACTATC ACTATTTATG GTACGAAAGA TGGCAAAGTT
GATATGAATA CTATTTTAGG ACAAAAGACA GTGATGATTC ATATTAATGT CGCTAAAAAA
GATATGAATA GCACATCAAT GATGATGAAA AAAGATAAGA TGACAATGCC TATGAAGAAA
GAAATGACTT CATCTAAAAT AAATACCGGT ATGATGATGT CTAACAACAA GATGTCAGCT
AATATGCAAA TGTCATCACA AGCCAAATCA AATGATAAAG CTGGTAAAAA AATGTCTATG
ATGTCTAAAA ATTTACCTAA TACAGGTGAA ACAAAGCAAC AAAATGTAGG TGTGCTAGGT
ATGCTTAGTC TAGCCTTTGC GACAGGTCTA ACTGCGCTAG GTCTTAAAAA ATCTAAACAA
AGATAG
|
|---|
| Protein sequence | MKISQYNKWS IRRLKVGAAS VMIASGSIVA LGQSHIVSAD EMSQPKTTIT APTANTSTNV
ESSTDKALSK VTTMETSSEM PKMQNMAKVE KTSDKPMMVA TSVRKMMATP TPVAMTKTTS
VDEVKKSTDT AFKQTVDVPA HYVNAAKGNG PFLAGVNQTI PYEAFGGDGM LTRLILKSSE
GAKWSDNGVD KNSPLLPLKG LTKGKYFYQV SLNGNTTGKE GQALLDQIKA NDKHSYQATI
RVYGAKDGKV DLKNMISPKM VTINIPHITT DMEVKNSLKM AFKEKVDVPA KYVSAAKAKG
PFLAGVNETI PYEAFGGDGM LTRLILKASE GAKWSDNGVD KNSPLLPLKD LTKGKYFYQV
SLNGNTAGKK GQALLDQIKA NGSHTYQATI TIYGTKDGKV DMNTILGQKT VMIHINVAKK
DMNSTSMMMK KDKMTMPMKK EMTSSKINTG MMMSNNKMSA NMQMSSQAKS NDKAGKKMSM
MSKNLPNTGE TKQQNVGVLG MLSLAFATGL TALGLKKSKQ R
|
|---|
| |