| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG0389 |
|---|
| Symbol | polA |
|---|
| ID | 1013184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | + |
|---|
| Start bp | 397169 |
|---|
| End bp | 399811 |
|---|
| Gene Length | 2643 bp |
|---|
| Protein Length | 880 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637315587 |
|---|
| Product | DNA polymerase I |
|---|
| Protein accession | NP_687423 |
|---|
| Protein GI | 22536572 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
|---|
| TIGRFAM ID | [TIGR00593] DNA polymerase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACA AGAATAAATT ACTTTTAATT GATGGCTCAT CTGTAGCCTT TCGTGCTTTT
TTTGCTCTTT ATAATCAAAT TGACCGCTTT AAAAACAATT CTGGACTTCA TACTAATGCC
ATATATGGTT TCCATTTGAT GTTGAATCAT ATTTTAGGTC GTGTCCAGCC TAGTCATATT
TTAGTGGCTT TTGATGCCGG AAAAACTACT TTCCGTACGG AAATGTATGC AGATTATAAA
GGTGGGCGTG CTAAAACTCC GGATGAATTT CGTGAACAAT TTCCTTACAT TCGTCAACAA
TTAGATGTCT TAGGCATCAA ACATTATGAA TTGGAACATT ATGAAGCCGA TGATATCATT
GGTACTCTTG CAAAACAAGC CGAAGCTAGT AATGAACATT TTGATATAAC GGTGGTTTCT
GGGGATAAAG ATTTAATTCA ATTAACAGAC ACTAACACGG TAGTAGAAAT CTCTAAAAAG
GGAGTTGCTG AGTTTGAAGA ATTCACGCCA GCTTACCTTA TGGAAAAAAT GGGAATTACG
CCGAGTCAAT TTATTGATTT AAAAGCTTTG ATGGGAGATA AATCAGATAA TATTCCTGGG
GTTACTAAAA TCGGTGAAAA AACTGGCTTG AAGTTGCTAT CAGAATATGG TTCCTTAGAA
GGGATCTATG AAAATATTGA GGCTATGAAA CAGTCTAAGA TGAAAGAAAA CCTTATCAAT
GATAAGGAGC AAGCTTTCTT ATCAAAGACC CTAGCTACAA TCAACATAGC ATCACCTATA
ACAATCGGCT TAGAAGATAT CCTTTATAGT GGACCGCAAG ATATAAAAGC CTTGTCTCAA
TTTTATGATG AGATGGATTT TAAACAGTTT AAAGCAGCTC TGGGTGAGGA GACAAGTCAG
GAAGATTTTG AGGTTGACTT TACTGAAGTG GAGCAATTAA AAACAGAAAT GTTCTCCGAT
AATGATTTTT ATTACTTTGA GATGTTGGGT GATAACTACC ATGTAGAAGA TTTAATTGGG
ATAGCTTGGG GAAATAGCGA TACAATCTAC GCTACTAGTA ATGTATCGTT ATTGCAAGAA
GCTTTATTTA AAAAAGCTTT ATCAAAACCT ATCAAAACTT ATGATTTTAA AAGAAGTAAG
GTCCTTTTAA ATCGTTTTAA TATTGATTTA CCAGAGCCAG CCTTTGATAC TAGATTGGCC
AAGTACCTTT TGTCTACTAC TGAGGATAAT CTAGTATCAA CAATTGCTAG GTTATATACA
AATCTGCCAC TGGATACTGA TGATGCTGTT TATGGGAAAG GTGCTAAACG CGCTATACCA
GAAAAAACAC GATTTCTTGA GCATCTAGCT AAAAAAGTAA AAGTTTTAGT GGATTCTGAG
GCTAATATTA TGCAACAGCT TAAAGCTAAT GAGCAAGAAG AATTGCTGTT TGAAATGGAG
CAACCTTTAG CGAATGTTTT AGCTAAAATG GAAATTCGAG GTATTAAGGT TAAGAAAAAT
ACCTTGAATG AAATGGCCAT TGAAAATCAA AAAGTCATCG AAACATTAAC ACAAGAAATC
TATGAATTGG CTGGGCAAGA GTTTAATATT AATTCTCCAA AACAGTTAGG AAAGTTGTTG
TTTGAAACGT TAGGTCTTCC TGTAGAAATG ACTAAAAAAA CAAAAACAGG TTATTCAACT
GCAGTAGATG TATTAGAGCG CTTAGCTCCG ATTTCTCCTC TTGTAACTAA AATTTTAGAG
TACCGTCAAA TCACTAAATT GCAATCAACC TATATTATTG GTTTACAAGA TTATATTTTA
GAAGATGGTA AAATTCATAC ACGTTATGTT CAAGATTTGA CTCAGACAGG TCGTCTTTCA
AGTTCTGACC CAAACCTTCA AAATATACCA GTTAGACTAG AGCAAGGACG GCTTATCCGA
AAAGCTTTTG TTCCATCAGA AGACAATGCT GTTTTATTGA GTTCAGATTA TTCTCAAATA
GAATTGCGCG TGTTAGCACA TATTTCAAAA GACGAACATT TGATCGCTGC CTTTAAAGAG
GGAGCTGATA TTCATACTTC AACAGCTATG CGTGTTTTTG GTATCGAAAA ACCTGAGAAT
GTCACTCCCA ATGATCGTCG AAATGCTAAG GCTGTTAATT TTGGAATTGT TTATGGTATT
TCAGATTTTG GTCTATCGCA TAATTTAGGA ATACCTCGTA AACTAGCGAA GCAATATATT
GACACCTATT TTGAGCGTTA TCCTGGAATA AAAAACTATA TGGAAACAGT TGTTCGTGAA
GCAAAAGATA AGGGTTACGT TGAAACACTT TTCCATCGTC GTCGTTCATT ACCAGATATT
AATTCTCGTA ATTTTAACAT TCGCCAATTT GCAGAGCGCA CAGCAATCAA TTCACCAATC
CAAGGAAGTG CAGCTGATAT TCTTAAAATT GCAATGATAA ATTTAGATAG GGTACTTGAT
AAAGGTGGTT ATAAATCAAA AATGCTGTTG CAAGTTCATG ATGAAATTGT ACTTGAAGTC
CCTAACGAGG AGATAGGAGC AATCAGGGAG TTGGTTACAA AAACAATGGA GTCAGCAATT
AGTTTATCGG TACCTTTGAT TGCAGATGAG AACGCAGGTG AGACTTGGTA TGAAGCGAAG
TAG
|
|---|
| Protein sequence | MTNKNKLLLI DGSSVAFRAF FALYNQIDRF KNNSGLHTNA IYGFHLMLNH ILGRVQPSHI
LVAFDAGKTT FRTEMYADYK GGRAKTPDEF REQFPYIRQQ LDVLGIKHYE LEHYEADDII
GTLAKQAEAS NEHFDITVVS GDKDLIQLTD TNTVVEISKK GVAEFEEFTP AYLMEKMGIT
PSQFIDLKAL MGDKSDNIPG VTKIGEKTGL KLLSEYGSLE GIYENIEAMK QSKMKENLIN
DKEQAFLSKT LATINIASPI TIGLEDILYS GPQDIKALSQ FYDEMDFKQF KAALGEETSQ
EDFEVDFTEV EQLKTEMFSD NDFYYFEMLG DNYHVEDLIG IAWGNSDTIY ATSNVSLLQE
ALFKKALSKP IKTYDFKRSK VLLNRFNIDL PEPAFDTRLA KYLLSTTEDN LVSTIARLYT
NLPLDTDDAV YGKGAKRAIP EKTRFLEHLA KKVKVLVDSE ANIMQQLKAN EQEELLFEME
QPLANVLAKM EIRGIKVKKN TLNEMAIENQ KVIETLTQEI YELAGQEFNI NSPKQLGKLL
FETLGLPVEM TKKTKTGYST AVDVLERLAP ISPLVTKILE YRQITKLQST YIIGLQDYIL
EDGKIHTRYV QDLTQTGRLS SSDPNLQNIP VRLEQGRLIR KAFVPSEDNA VLLSSDYSQI
ELRVLAHISK DEHLIAAFKE GADIHTSTAM RVFGIEKPEN VTPNDRRNAK AVNFGIVYGI
SDFGLSHNLG IPRKLAKQYI DTYFERYPGI KNYMETVVRE AKDKGYVETL FHRRRSLPDI
NSRNFNIRQF AERTAINSPI QGSAADILKI AMINLDRVLD KGGYKSKMLL QVHDEIVLEV
PNEEIGAIRE LVTKTMESAI SLSVPLIADE NAGETWYEAK
|
|---|
| |