Gene SAG0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0340 
Symbol 
ID1013134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp355238 
End bp355888 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content32% 
IMG OID637315537 
ProductHAD superfamily hydrolase 
Protein accessionNP_687374 
Protein GI22536523 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.369886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTAAAT ATAAAGCAAT AATATTTGAT ATGGATGGTG TTCTATTTGA CACTGAATTA 
TTTTATTATA AAAGGCGAGA GCGTTTTTTA AAACAACATG GAATTACAAT TGACCATTTA
CCAATGAATT TTTTTATTGG AGGAAATATG AAGCAGGTTT GGAAATCTGT TTTAGGTGAT
CAATATGATA CCTGGGATAT TGATAAGCTC CAACAAGATT ATAGTCGCTA TAAAGAGGAT
AATCCCTTGC CATACAAAGA TTTAATTTTT CAGGATTGTA AAAGAGTCAT TGAAAAGCTT
CATCACAAAG GCTATCTTTT GGGTCTAGCT TCAAGTTCTA CTAGACATGA TATCATGTTA
GCATTAGAAA GTTTTAATCT GGATACATAT TTTAAGGTAA TTCTGTCTGG TGAGGAATTT
TCAGAAAGTA AACCTAATCC AGCTATTTAT AATAGAGCAG CAGAACTTTT AGATATTCCT
AAACAGCAAA TTCTTATTGT AGAAGACAGT GAGAAGGGGA TTACAGCTGG TATTGCAGCC
GGTATTGATG TGTGGGCTAT TGAAGATAAA TACTTTGGAA TGAATCAGTC GCAGGCTAAT
GTATTAGTGA GCGATCTGAG TCAATTTTTT GTGAAATTAG ATAACTATTA A
 
Protein sequence
MCKYKAIIFD MDGVLFDTEL FYYKRRERFL KQHGITIDHL PMNFFIGGNM KQVWKSVLGD 
QYDTWDIDKL QQDYSRYKED NPLPYKDLIF QDCKRVIEKL HHKGYLLGLA SSSTRHDIML
ALESFNLDTY FKVILSGEEF SESKPNPAIY NRAAELLDIP KQQILIVEDS EKGITAGIAA
GIDVWAIEDK YFGMNQSQAN VLVSDLSQFF VKLDNY