Gene SAG0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0256 
Symbol 
ID1013045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp264842 
End bp265333 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content26% 
IMG OID637315449 
ProductECF subfamily RNA polymerase sigma factor 
Protein accessionNP_687291 
Protein GI22536440 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00208601 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTT TAGATGACTA TGAAAAAGAA TTACTAGTTA TTTCACATCA AATAATAGCT 
TACCTTATTA AGTCAGGTGT TAATCCTAGT CAAGCACAGG ATGTTACTCA AGACGTCTTT
TTACAAATAC TAGAATCTGA TTTCTCCCTT CCACTTGATA AAATAAAAGC TTGGATGTAT
CGTACTACAA TTAGGAGGTA TATTGATCTT TATCGAAGAA ATAAACGCTA TAACGAAATC
CTGCAAAAAG AATTCTTTAT AGAAAATAAT TTGTATTACA CCGAATCAGA GAAGTTTTTT
GAATTACATG AAGCAATATT ACACTTGAAG AAAGATTATC AAACTTTAAT AGATTTATAT
TATTTTAATG ATTTTTCAAT TAAAGAAATA TCTGAAATTA CTGGACAATC ACAAAGTACA
ATTAAAATAA GACTTATGCG AGCTAGAAGA GAAGTTAAAA AATATTTAGA AAAGGATAAT
TTTAAAATAT GA
 
Protein sequence
MSILDDYEKE LLVISHQIIA YLIKSGVNPS QAQDVTQDVF LQILESDFSL PLDKIKAWMY 
RTTIRRYIDL YRRNKRYNEI LQKEFFIENN LYYTESEKFF ELHEAILHLK KDYQTLIDLY
YFNDFSIKEI SEITGQSQST IKIRLMRARR EVKKYLEKDN FKI