Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0256 |
Symbol | |
ID | 1013045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 264842 |
End bp | 265333 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 637315449 |
Product | ECF subfamily RNA polymerase sigma factor |
Protein accession | NP_687291 |
Protein GI | 22536440 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00208601 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAATTT TAGATGACTA TGAAAAAGAA TTACTAGTTA TTTCACATCA AATAATAGCT TACCTTATTA AGTCAGGTGT TAATCCTAGT CAAGCACAGG ATGTTACTCA AGACGTCTTT TTACAAATAC TAGAATCTGA TTTCTCCCTT CCACTTGATA AAATAAAAGC TTGGATGTAT CGTACTACAA TTAGGAGGTA TATTGATCTT TATCGAAGAA ATAAACGCTA TAACGAAATC CTGCAAAAAG AATTCTTTAT AGAAAATAAT TTGTATTACA CCGAATCAGA GAAGTTTTTT GAATTACATG AAGCAATATT ACACTTGAAG AAAGATTATC AAACTTTAAT AGATTTATAT TATTTTAATG ATTTTTCAAT TAAAGAAATA TCTGAAATTA CTGGACAATC ACAAAGTACA ATTAAAATAA GACTTATGCG AGCTAGAAGA GAAGTTAAAA AATATTTAGA AAAGGATAAT TTTAAAATAT GA
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Protein sequence | MSILDDYEKE LLVISHQIIA YLIKSGVNPS QAQDVTQDVF LQILESDFSL PLDKIKAWMY RTTIRRYIDL YRRNKRYNEI LQKEFFIENN LYYTESEKFF ELHEAILHLK KDYQTLIDLY YFNDFSIKEI SEITGQSQST IKIRLMRARR EVKKYLEKDN FKI
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