Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0115 |
Symbol | rbsC |
ID | 1012884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 125556 |
End bp | 126488 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637315289 |
Product | ribose ABC transporter, permease protein |
Protein accession | NP_687151 |
Protein GI | 22536300 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAT ATATATCAGA GTTAACAACC CTGATTGCGT TAGCTGGTTT AATGGTTATT ATCACACTCA TTAATCCTAA TTTCCTCACA ACCAATAATC TACTCAATTT ATTATTACAA GTAACTGCAA ATGGTTTTAT CGCTTTCGGG ATGACCTTCG TTATTTTGAC TGGCGGTATT GATTTATCAG TCGGGTCCAT ATTAGCCCTA TCTAGTGCAT TAACAGCTGG ATTAATCGGC CACGGAGTAC CCGTTGGTAT TGCTATCGTT TTATCTGTTG CCTTAGGTGG CATCTTGGGA ATGCTAAACG GACTCTTCAT TTCTTACGGA AAATTAGCAC CATTTATCGT TACACTGGCA ACAATGACTA TCTTTAGAGG AGCAACGCTA GTTTATTCAA ACGGCAACCC AATTACCGCT GGCTTATCCG ATAGTTTTCT ATTCCAATTT TTGGGACAAG GCTATATTGT TGGTATCCCA TTCCCAGTCA TTCTCATGTT TCTTACTTTT ATTATTTTGT ATATTTTGTT ACATAAAACA GCCTTCGGGA AATCTGTTTA CGCTTTAGGA GGTAATGAAA AAGCAGCGTA TATCTCGGGT ATTAAGTTAA ACAAAGTTAA AATTATCATC TACACTATCT CAGGTATCAT GGCTTCCATT TCTGGGTTAA TTATCACATC ACGCCTTAGC TCAGCACAAC CAACAGCTGG AGCAAGTTAT GAGATGGATG CTATTGCCGC CGTTGTCTTA GGTGGAACGT CTTTATCTGG TGGGAAAGGA CGTATCATTG GAACATTGAT TGGTGCTCTT ATTATTGGTG TCCTGAACAA TGGATTAAAC ATCATTGGTG TCTCTGCATT TTGGCAACAA GTTGTGAAAG GTATCGTTAT TTTAATGGCT GTTTTACTTG ATCGCTTTAA AGTAGCAAAA TAG
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Protein sequence | MMKYISELTT LIALAGLMVI ITLINPNFLT TNNLLNLLLQ VTANGFIAFG MTFVILTGGI DLSVGSILAL SSALTAGLIG HGVPVGIAIV LSVALGGILG MLNGLFISYG KLAPFIVTLA TMTIFRGATL VYSNGNPITA GLSDSFLFQF LGQGYIVGIP FPVILMFLTF IILYILLHKT AFGKSVYALG GNEKAAYISG IKLNKVKIII YTISGIMASI SGLIITSRLS SAQPTAGASY EMDAIAAVVL GGTSLSGGKG RIIGTLIGAL IIGVLNNGLN IIGVSAFWQQ VVKGIVILMA VLLDRFKVAK
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