| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG0100 |
|---|
| Symbol | truA |
|---|
| ID | 1012868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | + |
|---|
| Start bp | 110027 |
|---|
| End bp | 110803 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637315273 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | NP_687136 |
|---|
| Protein GI | 22536285 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGGT ATAAGGCACA GATTTCTTAT GATGGTTCAG CTTTTTCAGG CTTCCAAAGA
CAACCAAATT GTAGGACAGT TCAAGAAGAA ATTGAGAGAA CTCTTAAGCG CCTAAATAGC
GGGAACGATG TGATAATCCA TGGTGCTGGT CGCACAGATG TTGGTGTTCA TGCTTATGGA
CAAGTTATCC ATTTTGATTT ACCACAGGCG CGTGATGTAG AAAAATTACG CTTTGGTTTA
GATACACAGT GTCCAGACGA TATTGATATT GTCAAAGTAG AGCAAGTGTC TGATGATTTT
CATTGTCGAT ATGATAAACA CATTAAAACT TATGAGTTTT TAGTGGATAT CGGTAGGCCG
AAAAATCCTA TGATGAGAAA CTATGCAACA CATTACCCTT ATCCTGTCAT TATTGAGCTT
ATGCAAGAAG CTATTAAAGA TTTAGTAGGT ACCCATGACT TTACAGGCTT TACTGCTTCA
GGTACGAGTG TAGAAAATAA AGTACGTACT ATTTTTGATG CGAAAATTCA GTTTGAAGCG
TCTAAAAATC TTTTAATTTT TACCTTTACA GGAAATGGTT TTTTGTATAA ACAGGTGCGT
AATATGGTTG GTACCCTGCT AAAAATTGGT AATGGACGCA TGCCTATTAG CCAAATCAAA
ACAATTTTAC AGGCTAAAAA TCGGGATTTA GCAGGTCCAA CTGCGGCAGG AAATGGTTTA
TATTTGAAGG AGATTATTTA TGAAGACGAG GAATGTTTTA GCAATTTCAG GAAATGA
|
|---|
| Protein sequence | MTRYKAQISY DGSAFSGFQR QPNCRTVQEE IERTLKRLNS GNDVIIHGAG RTDVGVHAYG
QVIHFDLPQA RDVEKLRFGL DTQCPDDIDI VKVEQVSDDF HCRYDKHIKT YEFLVDIGRP
KNPMMRNYAT HYPYPVIIEL MQEAIKDLVG THDFTGFTAS GTSVENKVRT IFDAKIQFEA
SKNLLIFTFT GNGFLYKQVR NMVGTLLKIG NGRMPISQIK TILQAKNRDL AGPTAAGNGL
YLKEIIYEDE ECFSNFRK
|
|---|
| |