| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG0084 |
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| Symbol | rpoA |
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| ID | 1012834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus agalactiae 2603V/R |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004116 |
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| Strand | + |
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| Start bp | 89286 |
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| End bp | 90224 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637315239 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | NP_687120 |
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| Protein GI | 22536269 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00222064 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGAGT TTGAAAAACC AATAATAACA AAAATTGATG AAAATAAAGA TTACGGCAGA
TTTGTCATCG AACCACTAGA ACGTGGCTAC GGTACAACTC TAGGAAACTC TCTTCGTCGT
GTGCTTCTGT CTTCACTTCC AGGTGCAGCA GTCACATCAA TCAAAATTGA TGGAGTATTA
CACGAATTTG ATACTATCCC AGGTGTACGT GAAGATGTGA TGCAAATCAT CCTTAATGTA
AAAGGACTTG CTGTGAAATC TTACGTCGAA GACGAAAAGA TTATCGAACT AGACGTTGAA
GGTCCTGCAG AAATTACTGC CGGAGATATT TTAACAGATA GTGATATCGA AATTGTAAAC
CCTGACCATT ATCTTTTCAC AATTGCTGAA GGTCACAGTT TGAAAGCAAC AATGACAGTT
GCTAAAAACC GAGGTTATGT TCCAGCAGAA GGAAATAAAA AAGATGATGC ACCAGTGGGA
ACATTGGCTG TAGATTCAAT CTATACACCA GTGAAAAAAG TTAATTATCA AGTTGAACCT
GCTCGTGTAG GTAGTAACGA TGGCTTTGAT AAATTAACTA TTGAAATCAT GACAAATGGC
ACAATCATTC CTGAGGATGC TCTTGGTCTT TCAGCTCGCG TCTTAATTGA ACACTTAAAC
TTGTTTACTG ATTTAACAGA GGTTGCTAAA GCAACTGAAG TAATGAAGGA AACAGAGAAA
GTGAACGATG AGAAAGTGCT TGACCGGACA ATTGAGGAAC TTGATTTGTC AGTGCGCTCA
TATAACTGTT TAAAACGTGC TGGAATTAAT ACAGTATTTG ATTTAACAGA AAAAACTGAG
CCTGAAATGA TGAAAGTCCG AAACTTAGGA CGTAAGAGTC TTGAAGAAGT TAAAATCAAA
CTTGCCGATC TAGGTCTTGG ATTAAAAAAC GATAAATAA
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| Protein sequence | MIEFEKPIIT KIDENKDYGR FVIEPLERGY GTTLGNSLRR VLLSSLPGAA VTSIKIDGVL
HEFDTIPGVR EDVMQIILNV KGLAVKSYVE DEKIIELDVE GPAEITAGDI LTDSDIEIVN
PDHYLFTIAE GHSLKATMTV AKNRGYVPAE GNKKDDAPVG TLAVDSIYTP VKKVNYQVEP
ARVGSNDGFD KLTIEIMTNG TIIPEDALGL SARVLIEHLN LFTDLTEVAK ATEVMKETEK
VNDEKVLDRT IEELDLSVRS YNCLKRAGIN TVFDLTEKTE PEMMKVRNLG RKSLEEVKIK
LADLGLGLKN DK
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