Gene SAG0073 details

Gene Information

• Locus tag: SAG0073
• Symbol: rplF
• ID: 1012823
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 83653
• End bp: 84189
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637315228
• Product: 50S ribosomal protein L6
• Protein accession: NP_687109
• Protein GI: 22536258
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.177407
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACGTA TTGGTAATAA AGTAATTACA TTGCCTGCAG GTGTTGAAAT CATTAACAAG 
GATAATGTTG TTACTGTAAA AGGACCTAAA GGCCAACTCA CTCGTGAGTT TAATAAAAAT 
ATTGGAATCA CTGTTGAAGG GACTGAAGTA ACAGTTACTC GTCCTAACGA CTCAAAAGAA 
ATGAAAACAA TTCATGGTAC AACTCGTGCG AACTTGAACA ACATGGTTGT TGGTGTTTCT 
GAAGGTTTCA AAAAAGCTCT TGAAATGCGC GGTGTTGGTT ACCGTGCACA ACTTCAAGGA 
TCAAAACTTG TTCTTTCTGT TGGTAAGTCT CACCAAGACG AAGTTGAAGC TCCAGAAGGT 
GTTACTTTTG AAGTGCCAAC TCCAACAACA ATCAACGTAA TCGGTATCAA CAAAGAAAGC 
GTTGGACAAA CTGCTGCTTA CGTTCGTAGC TTACGTTCAC CAGAACCATA TAAAGGTAAA 
GGTATTCGTT ACGTTGGTGA ATTCGTACGC CGTAAAGAAG GTAAAACAGG TAAATAA 

 

Protein sequence

MSRIGNKVIT LPAGVEIINK DNVVTVKGPK GQLTREFNKN IGITVEGTEV TVTRPNDSKE 
MKTIHGTTRA NLNNMVVGVS EGFKKALEMR GVGYRAQLQG SKLVLSVGKS HQDEVEAPEG 
VTFEVPTPTT INVIGINKES VGQTAAYVRS LRSPEPYKGK GIRYVGEFVR RKEGKTGK