Gene SAG0064 details

Gene Information

• Locus tag: SAG0064
• Symbol: rpsC
• ID: 1012814
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 79871
• End bp: 80524
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637315219
• Product: 30S ribosomal protein S3
• Protein accession: NP_687100
• Protein GI: 22536249
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0092] Ribosomal protein S3
• TIGRFAM ID: [TIGR01009] ribosomal protein S3, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00697995
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGTCAAA AAGTACATCC AATTGGTATG CGTGTCGGAA TCATCCGTGA CTGGGATGCG 
AAATGGTATG CTGAAAAAGA ATACGCGGAT TACCTTCATG AAGATCTTGC AATCCGTAAA 
TTCATTAATA AAGAATTAGC TGACGCATCA GTTTCAACTA TTGAAATTGA ACGTGCAGTA 
AACAAAGTTA TTGTTTCACT TCACACTGCT AAACCAGGTA TGGTTATCGG TAAAGGTGGA 
GCAAACGTTG ACGCTCTTCG TGGTCAACTT AACAAATTAA CTGGAAAACA AGTACACATC 
AACATCATTG AAATCAAACA ACCTGATTTA GATGCTCACC TTGTTGGTGA AAATATTGCT 
CGTCAATTAG AGCAACGTGT TGCTTTCCGT CGTGCTCAAA AACAAGCAAT CCAACGTACA 
ATGCGTGCAG GAGCTAAAGG TATTAAAACT CAAGTTTCTG GTCGTTTGAA CGGTGCTGAT 
ATCGCTCGTG CTGAAGGTTA TTCAGAAGGA ACTGTTCCGC TTCACACGCT TCGTGCTGAT 
ATCGACTATG CTTGGGAAGA AGCTGACACA ACTTATGGTA AACTTGGCGT TAAAGTTTGG 
ATTTACCGTG GAGAAGTTCT TCCAGCTCGT AAAAACACTA AAGGAGGCAA ATAA 

 

Protein sequence

MGQKVHPIGM RVGIIRDWDA KWYAEKEYAD YLHEDLAIRK FINKELADAS VSTIEIERAV 
NKVIVSLHTA KPGMVIGKGG ANVDALRGQL NKLTGKQVHI NIIEIKQPDL DAHLVGENIA 
RQLEQRVAFR RAQKQAIQRT MRAGAKGIKT QVSGRLNGAD IARAEGYSEG TVPLHTLRAD 
IDYAWEEADT TYGKLGVKVW IYRGEVLPAR KNTKGGK