Gene SAG0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0058 
SymbolrplC 
ID1012808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp76701 
End bp77327 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content42% 
IMG OID637315213 
Product50S ribosomal protein L3 
Protein accessionNP_687094 
Protein GI22536243 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00491271 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAG GAATCTTAGG GAAAAAAGTG GGAATGACTC AAATCTTCAC TGAATCAGGC 
GAATTCATCC CTGTTACTGT CATTGAAGCA ACTCCAAACG TTGTGCTTCA AGTTAAAACT
GTTGAAACAG ACGGTTACGA AGCAGTTCAG GTTGGTTTTG ATGACAAACG TGAAGTATTG
AGTAACAAAC CTGCCAAAGG CCATGTTGCA AAAGCAAACA CAGCTCCTAA GCGCTTCATT
CGTGAATTCA AAAACATTGA AGGCTTAGAA GTTGGTGCAG AATTATCTGT AGAACAATTT
GAAGCTGGTG ATGTTGTTGA CGTCACAGGG ACATCAAAAG GTAAAGGTTT CCAAGGTGTT
ATCAAACGCC ATGGTCAATC ACGTGGTCCT ATGGCTCACG GTTCTCGTTA CCATCGTCGT
CCAGGTTCTA TGGGACCTGT TGCGCCTAAC CGCGTTTTCA AAAACAAACG CTTGGCAGGA
CGTATGGGTG GTAACCGTGT AACAGTTCAA AACCTTGAAA TTGTACAAGT TATCCCAGAG
AAAAACGTTG TCCTCATCAA AGGTAACGTA CCAGGTGCTA AGAAATCTCT TATCACTATC
AAATCAGCAG TTAAAGCTGC TAAATAA
 
Protein sequence
MTKGILGKKV GMTQIFTESG EFIPVTVIEA TPNVVLQVKT VETDGYEAVQ VGFDDKREVL 
SNKPAKGHVA KANTAPKRFI REFKNIEGLE VGAELSVEQF EAGDVVDVTG TSKGKGFQGV
IKRHGQSRGP MAHGSRYHRR PGSMGPVAPN RVFKNKRLAG RMGGNRVTVQ NLEIVQVIPE
KNVVLIKGNV PGAKKSLITI KSAVKAAK