Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0058 |
Symbol | rplC |
ID | 1012808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | + |
Start bp | 76701 |
End bp | 77327 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637315213 |
Product | 50S ribosomal protein L3 |
Protein accession | NP_687094 |
Protein GI | 22536243 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00491271 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAG GAATCTTAGG GAAAAAAGTG GGAATGACTC AAATCTTCAC TGAATCAGGC GAATTCATCC CTGTTACTGT CATTGAAGCA ACTCCAAACG TTGTGCTTCA AGTTAAAACT GTTGAAACAG ACGGTTACGA AGCAGTTCAG GTTGGTTTTG ATGACAAACG TGAAGTATTG AGTAACAAAC CTGCCAAAGG CCATGTTGCA AAAGCAAACA CAGCTCCTAA GCGCTTCATT CGTGAATTCA AAAACATTGA AGGCTTAGAA GTTGGTGCAG AATTATCTGT AGAACAATTT GAAGCTGGTG ATGTTGTTGA CGTCACAGGG ACATCAAAAG GTAAAGGTTT CCAAGGTGTT ATCAAACGCC ATGGTCAATC ACGTGGTCCT ATGGCTCACG GTTCTCGTTA CCATCGTCGT CCAGGTTCTA TGGGACCTGT TGCGCCTAAC CGCGTTTTCA AAAACAAACG CTTGGCAGGA CGTATGGGTG GTAACCGTGT AACAGTTCAA AACCTTGAAA TTGTACAAGT TATCCCAGAG AAAAACGTTG TCCTCATCAA AGGTAACGTA CCAGGTGCTA AGAAATCTCT TATCACTATC AAATCAGCAG TTAAAGCTGC TAAATAA
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Protein sequence | MTKGILGKKV GMTQIFTESG EFIPVTVIEA TPNVVLQVKT VETDGYEAVQ VGFDDKREVL SNKPAKGHVA KANTAPKRFI REFKNIEGLE VGAELSVEQF EAGDVVDVTG TSKGKGFQGV IKRHGQSRGP MAHGSRYHRR PGSMGPVAPN RVFKNKRLAG RMGGNRVTVQ NLEIVQVIPE KNVVLIKGNV PGAKKSLITI KSAVKAAK
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