Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0056 |
Symbol | |
ID | 1012806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | + |
Start bp | 74844 |
End bp | 76082 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637315211 |
Product | MATE efflux family protein |
Protein accession | NP_687092 |
Protein GI | 22536241 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00168356 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAA ATATCTTACA AATGCTCATG GGAGTAGTTG ATAATTATCT AGTGGCTCAG TTAGGTGTTG TAGCAGTATC AGGTGTTTCA GTTGCTAATA ATATAATTAC TATTTATCAA GCTATTTTTA TAGCTTTAGG GGCGAGTATA GCAAGTCTAT TGGCCAAGTC GTTAGCAGGT AGTAAGAAGG ATGATGCAAT TTCAGTATGT TCTCAAGCCA TTTTTCTAAC ATTACTGATA GGGGCAGTAT TAGGAATTAT CTCGATTGTT TTTGGACAAA CTTTCTTTAA ACTTTTAGGG ACAACAAAAA GTGTCGCACA AGTTGGTGGT TTATATTTAG CAATTGTGGG TGGAGGTGTT GTTACTTTAG GAATGTTAAC CACCCTAGGC TCATTTTTAC GTGTGCAAGG GCAACCTCGT TTACCAATGT ATGTCAGTAT TTTTGTCAAT TTCCTCAATG CAGTCTTATC AGGTTTTGCT ATTTTTGAGT GGCGCTATGG TTTGGTCGGA GTGGCAGTAT CAACTCTTAT CGCAAGATTA ATTGGTATTT GTATCCTTGC GAAGTATCTT CCTATTAAAA AGATAATAAA AAGAATGACT TGGAAAATCA GTGCACAAAT TTGGAATCTT GCCTTACCAT CAGCAGGAGA ACGTCTGATG ATGCGAGCTG GAGATGTTGT TATAGTTGCT ATTGTTGTTC AGTTAGGTAC AAATGTTGTA GCGGGAAATG CTATTGGAGA AACCTTGACA CAATTTAATT ATATGCCAGG ACTTGGCATC GCAACTGCTA CAATTATCCT AACTGCAAAA TATGTAGGAC AAAAAAACAG AGAATCTATA GAAGAAACTA TTCAAAGTTC GTATTATATT GGCTTAGTTC TAATGATCCT TATATCAAGT TTTATGCTTC TTGCAGGCAA ACCATTGACA CAGTTATTTA CAAATAATCC TTCTGCCATT AAAGGAAGTT TGATTGTTAT TTTGCTATCT TTCGTAGGAG TACCTGCTAC TATTGGGACC TTGGTTTATA CAGCAGCTTG GCAAGGATTA GGAAATGCTA AACTCCCATT TTACACAACG ACTATAGGCA TGTGGTTAAT CAGAGTAGTT CTTGGTTATT TATTAGGAAT AGTTTTTGAA TTAGGTTTGC TTGGGGTTTG GATGGCTACG ATAGCAGACA ATATCTTTAG GTGGCTGTTT TTGAAAGTTC ACTATCATCG ATATATTCAA AAAATGTAA
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Protein sequence | MIENILQMLM GVVDNYLVAQ LGVVAVSGVS VANNIITIYQ AIFIALGASI ASLLAKSLAG SKKDDAISVC SQAIFLTLLI GAVLGIISIV FGQTFFKLLG TTKSVAQVGG LYLAIVGGGV VTLGMLTTLG SFLRVQGQPR LPMYVSIFVN FLNAVLSGFA IFEWRYGLVG VAVSTLIARL IGICILAKYL PIKKIIKRMT WKISAQIWNL ALPSAGERLM MRAGDVVIVA IVVQLGTNVV AGNAIGETLT QFNYMPGLGI ATATIILTAK YVGQKNRESI EETIQSSYYI GLVLMILISS FMLLAGKPLT QLFTNNPSAI KGSLIVILLS FVGVPATIGT LVYTAAWQGL GNAKLPFYTT TIGMWLIRVV LGYLLGIVFE LGLLGVWMAT IADNIFRWLF LKVHYHRYIQ KM
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