| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG0040 |
|---|
| Symbol | |
|---|
| ID | 1012790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | + |
|---|
| Start bp | 55017 |
|---|
| End bp | 55898 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637315195 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | NP_687076 |
|---|
| Protein GI | 22536225 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGAA CAGTAGCAAT TGATATTGGC GGTACAATGA TTAAGCATGG CATTGTGGAT
AATTTAGGTT GTATTGTTGA GGCAAGTGAG CTTGCCACAG AAGCCTACAA AGGTGGTCCA
GGCATTTTAC AAAAAGTTTG TCAAATTATC GATAACTATC TAGCAGAAGG GAGCATTGAT
GGAATTGCTA TCTCATCTGC TGGCATGGTA GATCCAGATG AAGGATGTAT ATTTTACTCT
GGTCCTCAAA TTCCAAACTA TGCTGGGACA CAATTTAAGA AAGTTTTAGA AGACACTTAT
CAAGTACGCA CAGAAATTGA AAATGATGTT AATTGTGCAG GATTAGCTGA AGCTGTCTCA
GGTAGTGCCA AAGATAGTTC AATAGCGCTT TGTCTTACTA TTGGAACAGG TATTGGTGGT
TGTCTGATTA TTGATAAAAC AGTTTTTCAT GGCTTTAGTA ATTCTGCTTG TGAAGTTGGC
TATATGCACC TTTCAGATGG TGATTTTCAA GATTTAGCCT CTACAACTGC ACTGATTGCT
GATGTTGCCA AAGCGCATGG AGATGAAATT AGCCGATGGG ATGGACGTCG TATTTTTCAG
GAGGCTAAAA AAGGCAATGA AAAATGTATT GCAAGTATAG ACCGTATGAT AAACTACCTT
GGCCAAGGAA TCGCTAATAT GGTTTATGTG GTAAATCCTG AAAAAGTTGT TTTAGGTGGT
GGAATCATGG CTCAAAAAGA TTATTTACAA GATAAACTTA GTGAATCTTT GAAACGAAAT
CTTGTGACAA GTCTTGCTGA AAAAACAGCA ATAGTCTTTG CACAACACGA AAACCAAGCT
GGTATGCTAG GAGCTTACTA CCATTTTAAA AACAGGGGGT GA
|
|---|
| Protein sequence | MTRTVAIDIG GTMIKHGIVD NLGCIVEASE LATEAYKGGP GILQKVCQII DNYLAEGSID
GIAISSAGMV DPDEGCIFYS GPQIPNYAGT QFKKVLEDTY QVRTEIENDV NCAGLAEAVS
GSAKDSSIAL CLTIGTGIGG CLIIDKTVFH GFSNSACEVG YMHLSDGDFQ DLASTTALIA
DVAKAHGDEI SRWDGRRIFQ EAKKGNEKCI ASIDRMINYL GQGIANMVYV VNPEKVVLGG
GIMAQKDYLQ DKLSESLKRN LVTSLAEKTA IVFAQHENQA GMLGAYYHFK NRG
|
|---|
| |