Gene SAG0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0034 
Symbol 
ID1012784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp49817 
End bp51133 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content35% 
IMG OID637315189 
Productsugar ABC transporter, sugar-binding protein 
Protein accessionNP_687070 
Protein GI22536219 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATCA AAAAAAGTGT GATTGGTTTT TGCCTCGGAG CTGCAGCATT ATCAATGTTT 
GCTTGTGTAG ACAGTAGTCA ATCTGTTATG GCTGCCGAGA AGGATAAAGT CGAAATTACG
TGGTGGGCTT TTCCAACCTT TACTCAAGAA AAGGCTAAGG ATGGAGTAGG TACTTATGAG
AAAAAAGTCA TCAAGGCTTT TGAAAAGAAA AATCCTAATA TAAAAGTAAA ACTAGAGACA
ATTGATTTCA CATCTGGACC TGAAAAAATC ACTACAGCGA TTGAAGCAGG GACAGCACCT
GATGTGCTTT TTGATGCACC AGGGCGAATT ATTCAATATG GTAAAAATGG TAAATTAGCA
GATTTGAATG ATTTATTTAC AGACCAATTT ATTAAGGATG TCAATAATAA GAATATCATT
CAAGCTTCTA AGTCTGGCGA TAAAGCCTAC ATGTATCCAA TAAGTTCTGC CCCATTTTAT
ATGGCGTTCA ATAAAAAAAT GCTTAAAGAT GCAGGAGTTT TGAAACTCGT AAAAGAAGGT
TGGACTACTA GTGATTTTGA AAAAGTACTA AAAGCACTAA AAAATAAAGG CTATACACCA
GGTTCATTCT TTGCAAACGG GCAAGGAGGA GATCAAGGAC CACGTGCATT TTTTGCTAAT
CTTTATAGTG CTCCAATAAC AGATAAAGAA GTAACAAAAT ATACCACTGA CACTAAAAAT
TCTGTAAAAT CAATGAAAAA AATAGTTGAA TGGATTAAGA AAGGCTACTT GATGAATGGG
TCTCAGTATG ATGGCTCAGC TGACATTCAA AACTTTGCCA ATGGACAAAC TGCTTTCACT
ATCCTATGGG CTCCAGCTCA ACCCAAAACT CAAGCAAAAT TATTAGAGTC AAGTAAAGTG
GATTACCTTG AAGTGCCATT CCCATCAGAA GATGGAAAAC CAGATTTAGA ATACCTTGTT
AATGGTTTTG CGGTCTTTAA TAATAAAGAT GAAAACAAAG TAAAAGCCTC TAAGAAATTT
ATCACTTTTA TTGCTGACGA TAAAAAATGG GGACCAAAAG ATGTTATACG TACAGGTGCT
TTCCCAGTTA GAACATCATT TGGAGATCTT TATAAAGGTG ATAAACGTAT GATGAAGATT
TCAAAATGGA CTCAATATTA TTCACCATAT TACAACACTA TCGATGGATT TTCTGAAATG
AGAACCTTAT GGTTCCCAAT GGTTCAATCT GTATCCAATG GTGACGAAAA ACCAGCAGAT
GCTTTGAAAG ACTTTACTCA AAAAGCAAAT GATACCATTA AAAAAGCAGC TAAATAA
 
Protein sequence
MSIKKSVIGF CLGAAALSMF ACVDSSQSVM AAEKDKVEIT WWAFPTFTQE KAKDGVGTYE 
KKVIKAFEKK NPNIKVKLET IDFTSGPEKI TTAIEAGTAP DVLFDAPGRI IQYGKNGKLA
DLNDLFTDQF IKDVNNKNII QASKSGDKAY MYPISSAPFY MAFNKKMLKD AGVLKLVKEG
WTTSDFEKVL KALKNKGYTP GSFFANGQGG DQGPRAFFAN LYSAPITDKE VTKYTTDTKN
SVKSMKKIVE WIKKGYLMNG SQYDGSADIQ NFANGQTAFT ILWAPAQPKT QAKLLESSKV
DYLEVPFPSE DGKPDLEYLV NGFAVFNNKD ENKVKASKKF ITFIADDKKW GPKDVIRTGA
FPVRTSFGDL YKGDKRMMKI SKWTQYYSPY YNTIDGFSEM RTLWFPMVQS VSNGDEKPAD
ALKDFTQKAN DTIKKAAK