Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0017 |
Symbol | pscB |
ID | 1012767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | + |
Start bp | 28902 |
End bp | 30245 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637315172 |
Product | PcsB protein |
Protein accession | NP_687053 |
Protein GI | 22536202 |
COG category | [S] Function unknown |
COG ID | [COG3883] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA GAATATTATC AGCAGTCCTT GTGAGTGGAG TAACTCTTGG AACTGCTGCC GTAACAGTAA ACGCTGATGA CTTTGACTCG AAAATTGCTG CTACTGATTC AGTAATCAAT ACTTTATCAG GGCAACAAGC AGCAGCACAA AACCAGGTGA CTGCTATTAA AGGACAAGTT GGTGCTTTAG AGTCTCAACA ATCAGAATTA GAAGCGCAAA ATGCTCAACT TGAGGCTGTA TCTCAGCAGT TAGGTCAAGA GATTCAAACT CTTTCTAATA AAATTGTTGC ACGTAACGAA TCTTTGAAAA AGCAAGTTCG TAGTGCTCAA AAGGGTAACT TGACTAACTA TATTAATACT ATTTTAAATT CGAAATCAGT ATCTGATGCT GTTAATCGTG TTGTTGCTAT TCGTGAGGTT GTTTCAGCTA ATGAAAAGAT GTTAGCACAA CAAGAGGCTG ACAAAGCGGC CTTAGAAGCT AAACAAATTG AAAATCAAAA TGCTATAAAT ACTGTAGCAG CTAACAAGCA AGCTATCGAA AATAATAAAG CAGCCTTAGC AACACAAAGA GCACAATTAG AAGCAGCTCA ATTAGAGTTA TCTGCTCAAT TGACTACAGT CCAAAATGAA AAAGCATCTT TAATTCAGGC AAAAGCACAA GCTGAGGAAG CTGCGCGTAA GGCAGCTGAA GCACAAGCAG CAGCTGAAGC GAAAGCACAA GCTGAAGCGA AAGCACAAGC TGAGTCTGTA GCAAAAGCAC AGGCAGCAGC ACAAGTTGAG TCTGCCACAG CTCCTACTGA AACAGTTCAA ACACAACCGA GAACTGAAAT AAAGCCTTCT AATCTTACGG CTACTTCTTC GGCAACTACT GTTGCTACAA CTACAGCTAC AGCTACTAAT GAGCCAAAAG TTACTCAACC TTCTGTAGTA ACTAAAGCAG TTGAAGCACC TAAAGCAGTT GTTTCTTCAA CACCTAGAGC GGTATCAAAA CCTGTTGTCA GAAGTTATGA TTCAAGTAAC ACATACCCAA TGGGACAATG TACTTGGGGA GCTAAGTCAA TGGCTTCTTG GGTTGGTAAC TATTGGGGAA ATGCTAATCA GTGGGGTGCT AGTGCACGTG CAGCTGGTTA TTCTGTAGGA ACTACCCCTC GTGTTGGTGC AGTAGCTGTT TGGCCATATG ATGGTGGTGG TTACGGGCAC GTTGCAGTAG TAACGTCAGT GGCTAACAAT TCATCTATCC AAGTTATGGA ATCAAACTAT GCTGGAAATA TGAGTATTGG CAATTACCGT GGTTCATTTA ACCCTAGTGC TTCTGGCTCT GTTTACTATA TTTACCCAAA TTAA
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Protein sequence | MKKRILSAVL VSGVTLGTAA VTVNADDFDS KIAATDSVIN TLSGQQAAAQ NQVTAIKGQV GALESQQSEL EAQNAQLEAV SQQLGQEIQT LSNKIVARNE SLKKQVRSAQ KGNLTNYINT ILNSKSVSDA VNRVVAIREV VSANEKMLAQ QEADKAALEA KQIENQNAIN TVAANKQAIE NNKAALATQR AQLEAAQLEL SAQLTTVQNE KASLIQAKAQ AEEAARKAAE AQAAAEAKAQ AEAKAQAESV AKAQAAAQVE SATAPTETVQ TQPRTEIKPS NLTATSSATT VATTTATATN EPKVTQPSVV TKAVEAPKAV VSSTPRAVSK PVVRSYDSSN TYPMGQCTWG AKSMASWVGN YWGNANQWGA SARAAGYSVG TTPRVGAVAV WPYDGGGYGH VAVVTSVANN SSIQVMESNY AGNMSIGNYR GSFNPSASGS VYYIYPN
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