| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1855 |
|---|
| Symbol | |
|---|
| ID | 3232482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | + |
|---|
| Start bp | 1745505 |
|---|
| End bp | 1746776 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637293205 |
|---|
| Product | major facilitator superfamily protein |
|---|
| Protein accession | YP_179825 |
|---|
| Protein GI | 57238694 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.14226 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACA AAACTTATAA ATTTCATCCA AATGACACAA AAATGGATAA AAAAATAATT
CAAATTACTG AAAAGTCCGG ATTTAAAGCA GCTGTGTTTT CTATGGCTGC TATGACTATG
CTAGGAAGTG TGGTCATTTC ATCTGCTCTG CCTGCTATCA ATAGACATTT TGAAGAACTT
TTAACCCAAA GTGGCGCTAC TCTTGCTTCA AGTTTCACAT TAGCTCATCT TGATATACTT
GTTCGCTTAG TTTTAACCAT CCCTGCTATT TTTGTTGTCA TTTTATCTCC ATTTGCTGGT
ATTTTAATGG ATAAATTTGG CAAATTAAAA TTCATTCTTC CAGCTATGGT GGTTTGGACT
ATTTCTGGGA TAAGTGGCTT TTTCTTAAAT GATATTTATG CTATACTGAC TTCAAGAGCT
ATTTTTGGTA TGGCAACTGC TTTTATAATG ACAGGCGCTT CGGCTTTGCT TGGGGATTAT
TATAGTCGTG GTGGCTTTAA TCGCAGAGAA AATGCTTTAA GTCTTCAAGG ATTTTTTTGT
GCGGTAGGGG GTGCTGTTTT TATTTCTATT GCGGGATTTG TTTCAAGTTA TTCTTGGCGT
TATCCTTTTT TGGTATATGG ACTTGGAATT TTAATTACCT TAATGGCTAT CATTTATCTT
TTTGAACCTA GAAAATTTAA ATTCTATAAT CATACAAAAA TAGAAACAAA AACAAATTAT
TGGCAATTTT TCCCTATCTA TTTTATAGGT TTTTTTATCA TGGTAGTTTA TTATATTTCG
CCAACTCAAC TTCCTTACTA TATAGAAGAA CATTTGGGAT TGGATCCTAA ATATATAGGT
ATTTCGATGT CTGTATCTGC ACTATGTTAT GGTTTTTTCT CTCTAAGCTA TAGATATATT
ATAAAATTCT TAAGTATTAA AACTATTTAT GTTTTAACTC TTTTTATCGT ATCTTGTTCT
TTTTTGCTGC TTTTTTTAGT AGATAGCTTT TTCACAGTTT TAATCGCCTT AGCTTTGCTT
GGAATGGGTG GAGGTATTAT GCTTGTAAAT AATACGGCTT ATCTTTTTTC AATCTGTCCT
GAAAATGCTC GCTCTAGGGC TTATGGAATT TTAGCAAGTT GTATATTTTT AGGACAATTT
TTAAGTCCTA TTATCTCTCA ACCTATCGTT AGACAAATGG GTCTTGTAGA TGCTTTTTTA
ATATGGTCAA TAGTAATTTT TATAGTGTGC ATTGTGTTTT TATTTTTAAA GCAAAAACCT
AGAATAAATT AG
|
|---|
| Protein sequence | MNDKTYKFHP NDTKMDKKII QITEKSGFKA AVFSMAAMTM LGSVVISSAL PAINRHFEEL
LTQSGATLAS SFTLAHLDIL VRLVLTIPAI FVVILSPFAG ILMDKFGKLK FILPAMVVWT
ISGISGFFLN DIYAILTSRA IFGMATAFIM TGASALLGDY YSRGGFNRRE NALSLQGFFC
AVGGAVFISI AGFVSSYSWR YPFLVYGLGI LITLMAIIYL FEPRKFKFYN HTKIETKTNY
WQFFPIYFIG FFIMVVYYIS PTQLPYYIEE HLGLDPKYIG ISMSVSALCY GFFSLSYRYI
IKFLSIKTIY VLTLFIVSCS FLLLFLVDSF FTVLIALALL GMGGGIMLVN NTAYLFSICP
ENARSRAYGI LASCIFLGQF LSPIISQPIV RQMGLVDAFL IWSIVIFIVC IVFLFLKQKP
RIN
|
|---|
| |