| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1854 |
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| Symbol | topA |
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| ID | 3232481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni RM1221 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003912 |
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| Strand | - |
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| Start bp | 1743208 |
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| End bp | 1745310 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637293204 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_179824 |
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| Protein GI | 57238693 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA ATTTAATCAT AGTAGAATCT CCTGCAAAAG CTAAAACCAT AGGAAATTTT
TTGGGAAAAG ATTATGAAGT TATCGCTTCT AAAGGACATA TTAGAGATTT GCCTAAATCA
AGCTTTGGGA TTAAAATAGA AGATGATGAA TTTATCCCTG AGTATAGAAT CACAAGTGAT
CATAGCGCCT TAGTTAAAGA ACTTAAAAGC AAAGCCAAAG ATGCCAAAGA AGTCTATCTT
GCAACGGATG AAGATAGAGA AGGAGAGGCT ATAGCCTATC ATATTGCAAA AGCTATAGGA
AAAGATGAAA ACACCTTACC ACGCATTGTT TTTCATGAAA TCACTAAAAG CGCTATAGAA
AATGCTTTAA AAAATCCAAG AAAATTAAAC ATGCACTCTG TAAATGCTCA GCAAACCAGA
CGTCTTTTAG ATCGCATTGT AGGGTATAAG CTCAGCCCTT TATTAGGACA AAAAATTCAA
AGAGGACTTA GTGCTGGGCG TGTTCAAAGT GCGGCTTTAA AGATCATAGT CGATCGTGAA
AAAGAAATTC GTGCCTTTGT ACCCCTAGAA TACTTTAGTA TTGATATGAT TTTTCAAAAA
GATTTAGATG CAGAACTAGT TGAGTTTGAT AAAGCCAAGA TAGAAAAACT TACCATTACC
AACAAAGATC GTGCTAAACT TATACTAGAA GCTTGTAAAA ATGAAGTTTA TAGTATAAGT
GACATTGAAA GCAAAGAAAG AAAAATCGCT CCGCCGCCTC CTTTTATGAC TTCAACTTTA
CAACAAAGTG CCAGCAATCG CCTTGGTTTT AACCCTAAAA AAACCATGAT GATAGCTCAA
AAGCTCTATG AAGGAGTAAA TACCCATGAA GGCGTGATGG GGGTTATTAC TTATATGAGA
ACCGATAGTT TAAATTTAGC CAAAGAAGCA GTAGAAAATG CAAGAAAATT CATACAAGCA
AATTTTGGCA AGGACTATCT TCCAAGCAAA GCAAATGTAT ATACTACAAA GACTAAAGGC
GCTCAAGAAG CTCATGAAGC TATACGCCCT ACAAATTTAA GTTTTACTCC AGAAATTGCG
GCTAAATTTT TAGACAAAGA TGAGTTAAAA CTTTACACAC TTATTTACAA TCGCTTTTTA
GCCTGTCAGA TGAGTCCTGC TATCTCTCAA ACTCAAAATG TATTTGTAAA AAATGATAGA
GCAGTTTTTA AAATAAGCGG TAGAAAAATC CTTTTTGATG GATATTATAA AGTTTATGGT
GATATGGATA AGGATAAAAT TTTGCCAAAT TTTAAAATAG GCCAAAATTT AAAAGTGCAA
AATTTAGAAA TGAACTCACA TTTTACCGAA CCACCTTCAA GGTATTCAGA AGCAGGACTT
GTAAAAAAAC TTGAAAGTTT AGGCATAGGT CGCCCTTCTA CTTATGCACC AACCATTTCT
ATACTTACAA GCCGTGATTA TGTAACAATA GATAAAAAAC AACTCATTCC TAGCGATGTT
GCTTTTAATG TAACCGAAGT GCTTGAGAAA AATTTTAGCG ATATAGTAGA TAGTAAATTT
ACTTCAAACC TTGAAAATAC CCTAGATGAA ATCGCAGAAG ATAAGGCAGA TTGGCAAGAA
ACTTTAAAAG AATTTTACTA TCCTTTTATG AGAAAAATCG AAGAAGGAAA AACAAAAATA
GCTAGTCAAA AAACTGTCAC AAAACTAGGC GAAAGTTGTC CTGATTGTGG CGGAGAGCTT
GCTATTAGAA AAGGGCGTTT TGGAGAATTT GTAGCGTGTT TAAATTTCCC AAAATGCAAG
TATTCAAGAA ATTTAAAAAG TGAAAGCAAA AACGAAAGCG AAAATACAGC CGCAAAAGCT
AAAGCTAATG GTACAGGCAT TACTTGTCCA AGTTGTCAAA AAGGTGAAAT CGTAGAACGC
TTTTCAAAAC GTGGTAAATT TTATGGCTGT AGTGCTTATC CAAAATGCAA TTTTATAAGC
AAATACAAAC CAAGTGAAGA AAAATGCGAA GAGTGTGGCG AAACTTTAGT GATAAAAGAG
CTTAAAAAAG GTACATTCTT AGAATGTTTA AAGTGTAAAA TCAAAAAAGA AATGAAGGAT
TAG
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| Protein sequence | MKKNLIIVES PAKAKTIGNF LGKDYEVIAS KGHIRDLPKS SFGIKIEDDE FIPEYRITSD
HSALVKELKS KAKDAKEVYL ATDEDREGEA IAYHIAKAIG KDENTLPRIV FHEITKSAIE
NALKNPRKLN MHSVNAQQTR RLLDRIVGYK LSPLLGQKIQ RGLSAGRVQS AALKIIVDRE
KEIRAFVPLE YFSIDMIFQK DLDAELVEFD KAKIEKLTIT NKDRAKLILE ACKNEVYSIS
DIESKERKIA PPPPFMTSTL QQSASNRLGF NPKKTMMIAQ KLYEGVNTHE GVMGVITYMR
TDSLNLAKEA VENARKFIQA NFGKDYLPSK ANVYTTKTKG AQEAHEAIRP TNLSFTPEIA
AKFLDKDELK LYTLIYNRFL ACQMSPAISQ TQNVFVKNDR AVFKISGRKI LFDGYYKVYG
DMDKDKILPN FKIGQNLKVQ NLEMNSHFTE PPSRYSEAGL VKKLESLGIG RPSTYAPTIS
ILTSRDYVTI DKKQLIPSDV AFNVTEVLEK NFSDIVDSKF TSNLENTLDE IAEDKADWQE
TLKEFYYPFM RKIEEGKTKI ASQKTVTKLG ESCPDCGGEL AIRKGRFGEF VACLNFPKCK
YSRNLKSESK NESENTAAKA KANGTGITCP SCQKGEIVER FSKRGKFYGC SAYPKCNFIS
KYKPSEEKCE ECGETLVIKE LKKGTFLECL KCKIKKEMKD
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