| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1801 |
|---|
| Symbol | exbD |
|---|
| ID | 3232428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | + |
|---|
| Start bp | 1697599 |
|---|
| End bp | 1698009 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 637293147 |
|---|
| Product | biopolymer transport exbD protein |
|---|
| Protein accession | YP_179772 |
|---|
| Protein GI | 57238641 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02804] TonB system transport protein ExbD, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.221711 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATAA GGCAAATAAA AATGCTTAAA CTACCAAAAA ATGAAGGTTT AAATATAGTC
CCATTTATAG ACATTATGCT TGTTTTGCTT GCTATAGTGC TTAGTATTTC AACCTTTATT
GCACATGGAA AAATTCAAAT CTCACTTCCT TCAAGTGAAA ATGCTACCAA TATAAGCAAT
AATGAAAAAA AACTTCTTAT AACCATAGAC GAAAAAAATA CTTTTTATTT AAATGATAAA
TTAGCTGATT TAAATGAAGT TCAAAATGCT ATTTTTTCAC TTGATAAAAA AACCATAGTA
GAACTAAAAA GCGATAAAAA TGCTAAATTT GAAAGCTTTG TAAAAATTAT AGATTTTTTA
AAAGCCAAAG AACATGAAAA TTTTCAGATT CTTACTGAGA AAAACAAATG A
|
|---|
| Protein sequence | MLIRQIKMLK LPKNEGLNIV PFIDIMLVLL AIVLSISTFI AHGKIQISLP SSENATNISN
NEKKLLITID EKNTFYLNDK LADLNEVQNA IFSLDKKTIV ELKSDKNAKF ESFVKIIDFL
KAKEHENFQI LTEKNK
|
|---|
| |