Gene CJE1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJE1766 
SymbolrpsD 
ID3232393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni RM1221 
KingdomBacteria 
Replicon accessionNC_003912 
Strand
Start bp1664424 
End bp1665050 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content37% 
IMG OID637293109 
Product30S ribosomal protein S4 
Protein accessionYP_179738 
Protein GI57238607 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.534162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAT ATAGAGGACC AGTAGAAAAA TTAGAAAGAC GCTTTGGTGT TAGCTTAGCA 
TTAAAAGGAG AAAGAAGACT AGCTGGCAAA AGTGCACTAG ACAAACGCCC TTATGCGCCA
GGACAACACG GAGCAAGAAA AGGTAAAATT AGTGAGTATG GACTTCAATT AAGAGAAAAA
CAAAAAGCTA AATTTATGTA TGGAGTAAGC GAAAAGCAAT TCCGTCGTTT ATTTGCTGAA
GCAGCAAGAA GAGAAGGAAA TACAGGGGTA TTACTTATCC AGCTTTTAGA ACAAAGATTA
GACAATGTGG TATATAGAAT GGGTTTTGCT ACAACACGTC GTTTTGCAAG ACAACTTGTA
ACACATGGAC ATATTTTAGT AAATGGTAAA AGAGTGGATA TTCCTAGCTT TAGAGTAGAA
GCAGGTGCTA AAATCGAAAT CATCGAAAAA AGCAAAAACA ATCCTCAAAT AACAAGAGCT
ATCGAACTTA CAGCACAAAC TGGAATCGTT GCTTGGGTTG ATGTTGAAAA AGATAAGAGA
TTTGGAATTT TCACAAGAAA ACCTGAAAGA GAAGAAGTTG TCATTCCGGT TGAGGAAAGA
TTTATCGTTG AGCTTTACTC TAAGTAA
 
Protein sequence
MARYRGPVEK LERRFGVSLA LKGERRLAGK SALDKRPYAP GQHGARKGKI SEYGLQLREK 
QKAKFMYGVS EKQFRRLFAE AARREGNTGV LLIQLLEQRL DNVVYRMGFA TTRRFARQLV
THGHILVNGK RVDIPSFRVE AGAKIEIIEK SKNNPQITRA IELTAQTGIV AWVDVEKDKR
FGIFTRKPER EEVVIPVEER FIVELYSK