Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE1702 |
Symbol | dapF |
ID | 3232329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 1602025 |
End bp | 1602774 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637293051 |
Product | diaminopimelate epimerase |
Protein accession | YP_179680 |
Protein GI | 57238549 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATTTT ATAAATATTG TGCAAGTGGG AATGATTTTG TCATAACAAA TGCTGATAGA AAAGAAGATA GAAGTGCTTT AGCTAAAGAA CTTTGCAATC GTTATGAGGG CATAGGTGGG GATGGCTTTA TCGTGATATT GCCTCATGAA AAATACGACT TTGAATGGGA ATTTTATAAT AACGATGGCT CAAGGGCTGC TATGTGTGGC AATGGCTCAA GGGCTGCGGC ACATTTTGCA CATCATATTA ACAAAATAAA TCCTAACATG AGTTTTTTAA CCGGTGCAGG AATAATAAAA GCAAAGGTAA ATCAAGATAA AGTTGAAGTA TCTTTAGGCA AAATAAAAAG CGTGCAAAAT ACTTTTGAAG AATTAGGAAA AACTTGGCAA CTTTGCGACA CTGGAGTTCC ACATCTAGTG CATTTTTGTC AAAATTTAGA TGAATTTGAT ACAATACTTT GTCAAAAAAT GAGACAAAAA TATAATGCCA ATGTTAATTT TGTAAAAATT TTAGATGAAA ATCATTTAAA AGTTCGTACC TATGAACGCG GAGTTGAAGA TGAAACCTTA GCTTGTGGCA CAGGAATGGG GGCTTGTTTT TATCTGGCAT TTTTAAATAA AAAAGTACAA AATAAAGTTA AAATAACTCC TAAAAGTGGT GAAGAGGTTG GGTTTACATA TAAAAATGAA GAATTGTTTT TTGAAGGAAA GGTAAAGTAT TGTTTTGAAG CCAATTATAA TTTTTCTTAG
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Protein sequence | MKFYKYCASG NDFVITNADR KEDRSALAKE LCNRYEGIGG DGFIVILPHE KYDFEWEFYN NDGSRAAMCG NGSRAAAHFA HHINKINPNM SFLTGAGIIK AKVNQDKVEV SLGKIKSVQN TFEELGKTWQ LCDTGVPHLV HFCQNLDEFD TILCQKMRQK YNANVNFVKI LDENHLKVRT YERGVEDETL ACGTGMGACF YLAFLNKKVQ NKVKITPKSG EEVGFTYKNE ELFFEGKVKY CFEANYNFS
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