Gene CJE1688 details

Gene Information

• Locus tag: CJE1688
• Symbol: nspC
• ID: 3232316
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: -
• Start bp: 1588897
• End bp: 1590045
• Gene Length: 1149 bp
• Protein Length: 382 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637293040
• Product: carboxynorspermidine decarboxylase
• Protein accession: YP_179669
• Protein GI: 57238538
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0019] Diaminopimelate decarboxylase
• TIGRFAM ID: [TIGR01047] carboxynorspermidine decarboxylase

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0811745
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTATG AAAAAATTCA AACTCCAGCT TATATTTTAG AAGAAGATAA ATTAAGAAAA 
AATTGTGAGC TTTTAGCAAG TGTTGGTGAA AAAAGTGGTG CTAAAGTGCT TTTAGCTTTA 
AAAGGTTTTG CTTTTTCAGG AGCTATGAAA ATTGTCGGAG AATACCTAAA AGGTTGCACT 
TGTAGCGGAC TTTGGGAAGC AAAATTTGCT AAAGAATACA TGGATAAAGA AATTCATACT 
TATTCGCCTG CTTTTAAAGA AGATGAAATA GGTGAAATAG CCAGTTTATC TCATCATATA 
GTGTTTAACT CTTTAGCTCA ATTTCATAAA TTTCAAGCTA AAACACAAAA AAATTCCTTA 
GGTCTTCGTT GTAATGTTGA ATTTTCTCTA GCCCCAAAAG AACTTTACAA TCCTTGTGGA 
AGATACTCAA GACTTGGAAT TCGTGCTAAA GATTTTGAAA ATGTGGATTT AAATGCTATA 
GAAGGACTTC ATTTTCACGC ACTTTGCGAA GAAAGTGCTG ATGCTTTAGA GGCTGTTTTA 
AAGGCTTTTG AGGAGAAATT TGGTAAATGG ATAGGGCAAA TGAAATGGGT GAATTTTGGA 
GGAGGACATC ACATCACCAA AAAAGGCTAT GATGTTGAAA AACTTATTGC TTTGTGTAAA 
AATTTCAGCG ATAAATATGG TGTACAAGTT TATCTTGAAC CAGGTGAAGC AGTGGGTTGG 
CAAACAGGAA ATTTGGTTGC TAGTGTAGTA GATATCATAG AAAATGAAAA ACAAATTGCT 
ATTTTAGATA CTTCAAGCGA AGCACATATG CCAGATACTA TCATCATGCC TTATACAAGT 
GAAGTTTTAA ATGCTAGAAT TTTAGCCACG AGAGAAAATG AAAAAATTTC AGACTTAAAA 
GAAAACGAAT TTTCCTATTT ACTAACCGGA AATACTTGTT TAGCAGGTGA TGTAATGGGA 
GAATATGCCT TTGATAAAAA GCTTAAAATC GGCGATAAAA TTGTTTTTTT AGATCAAATT 
CATTACACCA TTGTGAAAAA CACAACTTTT AATGGTATAA GACTTCCAAA TCTCATGCTT 
TTAAATGCAA AAAATGAACT TCAAATGATA AGAGAATTTT CTTATAAGGA TTATTCTTTA 
AGAAATTAG 

 

Protein sequence

MFYEKIQTPA YILEEDKLRK NCELLASVGE KSGAKVLLAL KGFAFSGAMK IVGEYLKGCT 
CSGLWEAKFA KEYMDKEIHT YSPAFKEDEI GEIASLSHHI VFNSLAQFHK FQAKTQKNSL 
GLRCNVEFSL APKELYNPCG RYSRLGIRAK DFENVDLNAI EGLHFHALCE ESADALEAVL 
KAFEEKFGKW IGQMKWVNFG GGHHITKKGY DVEKLIALCK NFSDKYGVQV YLEPGEAVGW 
QTGNLVASVV DIIENEKQIA ILDTSSEAHM PDTIIMPYTS EVLNARILAT RENEKISDLK 
ENEFSYLLTG NTCLAGDVMG EYAFDKKLKI GDKIVFLDQI HYTIVKNTTF NGIRLPNLML 
LNAKNELQMI REFSYKDYSL RN