Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE1618 |
Symbol | kpsD |
ID | 3232246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | - |
Start bp | 1522058 |
End bp | 1523716 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637292969 |
Product | capsular polysaccharide ABC transporter, periplasmic polysaccharide-binding protein |
Protein accession | YP_179599 |
Protein GI | 57238468 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TATTAATTTT ACTTTTTAGT TGTATTTTAT GTTTTGGAGC TGTGGATGTT TCACAAATCA TTTCAGCAGA GGATCAAGGT TCTACTACAA CTAGCATAGA TCAAAATTTA AGCTCAAATT ATGATATAGC AAATAAAGAA AATAATCTTA CAAAAATTCA TCAAATTTTA GTATTCGGTG CTCATCTTTT TAATGGAAAT TTTAAAAATT ACAATCAAAG AGTTTATAAC CCAGATTATA AGATCGCAGT TGGTGATCAA ATCAGTCTTA AAATTTGGGG AGCTGTTGAG TTTTCGCAAG TTTTAGTGGT GGATTCTCAA GGAAATATTT TTATCCCTAA AGTAGGAGCT GTAAATTTAC TAGGTGTGAA AAATAGCGCC CTTGTAAGTG TTATAAAAGC ACGTGTTAAT AAAATCTATA AAAGCAATGT TTTTGTTTAT GCAGATATGA ATGCTTATCA AAATGTCAGT GTTTTTGTAA CAGGAAGTGT TAATGCTCCA GGACTTTATC AAGGACTTAG TTCGGATTCA GTGATACAGT ATCTTGATAA AGCAGGGGGT ATAAATTTAG AATATGGAAG TTTTAGAGAT ATTCAAATTT TGCGTAATAA CAGCGTGATA AAAAATATTG ATTTATATGA TTTTTTGCTA AAAGGGCAAA TGGATCTTTT TCTTTTTAGA AGCGGAGATG TTATTTTAGT AGGAAATGTT CAAAATTACG CTTTTGTTGA TGGTGATGTG CAAAGACCTT TTCGTTTTGA ACTTTCAAAT GATATTAAAA CTTTAGCTGA CTTAGCTAGA GTATCAGGTG CTAAACCTAT TGTAACTAAT GCTATCGTAA AAAGTTATGG TGAAGATCAT AAACTTGATG TCAGTGCTTA TAATAAAATG CAATTTCCAA AAGTTTTACT TAGAACGGGA GATGAGGTAG AATTTCACCC TGAGTATGTT TCTAAAAATA TAACTATAAG TGTAAATGGC GAGCATAATG GTTTAAAAAC TTTAGTTGTG GGTAAAGGAA CGACTTTAGA AGATATTTCT AAATTAATTA AAGCCAATCC ACAATCAAAC ATGCAAGCTT TACAAGTGTT TAGAAAAAGT GTAGCTAGAA CTCAAAAAGA ACTTATCAAT GCTCAGCTTA AAGAGCTTGA AACTCTAGCT TTAACTAGTG GTTCTGTTAC AGCTCAAGGT GCAGCTATAA GAGCTCAACA AGCAAAAACG ATTTTAGAAT TTATCCAAAG AGCTAAGCAA GTAGAGCCTA AGGGTCAAAT TGTCATTGAT AATCCAAAGT CTTATAATTC GGTTATTTTA GAAGATGGTG ATACTATTAA TGTACCAAGT AAGAATAATC TCATCATAGT TCAAGGTGAG GTTTCTTTAC CTGGAGCTTT TGTGTATGAT AAGGGCAAAG ATTTAAGATA TTATATCAAT CTTGCAGGAG GTTATGGAGA AAGAGCGGAT ACTTCAAAAG TTTTGGTGAT ACGAAGCAAT GGAAAAGCTG AAAAATATCA TAGTGGTATA GATATGAAAC CAGGCGATTC TGTGTTGGTA TTGCCAAAAG TAGATAGTGA GAATTTGCAA ATTTTTTCAA TGTTAACTCA AATTCTTTAT CAAATTGCTA TTGCAACCAA TGTTGTGCTT AATCTTTAA
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Protein sequence | MKKILILLFS CILCFGAVDV SQIISAEDQG STTTSIDQNL SSNYDIANKE NNLTKIHQIL VFGAHLFNGN FKNYNQRVYN PDYKIAVGDQ ISLKIWGAVE FSQVLVVDSQ GNIFIPKVGA VNLLGVKNSA LVSVIKARVN KIYKSNVFVY ADMNAYQNVS VFVTGSVNAP GLYQGLSSDS VIQYLDKAGG INLEYGSFRD IQILRNNSVI KNIDLYDFLL KGQMDLFLFR SGDVILVGNV QNYAFVDGDV QRPFRFELSN DIKTLADLAR VSGAKPIVTN AIVKSYGEDH KLDVSAYNKM QFPKVLLRTG DEVEFHPEYV SKNITISVNG EHNGLKTLVV GKGTTLEDIS KLIKANPQSN MQALQVFRKS VARTQKELIN AQLKELETLA LTSGSVTAQG AAIRAQQAKT ILEFIQRAKQ VEPKGQIVID NPKSYNSVIL EDGDTINVPS KNNLIIVQGE VSLPGAFVYD KGKDLRYYIN LAGGYGERAD TSKVLVIRSN GKAEKYHSGI DMKPGDSVLV LPKVDSENLQ IFSMLTQILY QIAIATNVVL NL
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