| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1301 |
|---|
| Symbol | ldh |
|---|
| ID | 3231808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | + |
|---|
| Start bp | 1217523 |
|---|
| End bp | 1218449 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637292654 |
|---|
| Product | L-lactate dehydrogenase |
|---|
| Protein accession | YP_179288 |
|---|
| Protein GI | 57238039 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.123994 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA TCGGTATAGT TGGTTTAGGT TATGTAGGAG CTGCTAGTGC TTATAGCATA
GTTACTCAAG GAATTTGTTC AGAACTTTAC TTATATGATA TAAAACAAGA TTTAGCTCTA
GCTCATGCAA GAGATTTGGA AGATATGTCA GCCATTCATT TTTCTTATAC AAAAATTTTT
CATGTGCCAA ATTTAGAAAA TTTAGCTTCT TGCGATATTA TCATTTTAGC TTTTAGAAAA
GAAAGCTTAA AAGAATTACC TAGTCGCTTA GTAGAACTTC AAAACAATAT CCTCGAACTT
AAAGACATTG TCTTAACCTT AAAAAATGCT AATTTTAAAG GCAAATACAT TGTCGCAACA
AATCCAAATG ACACCATAAC TTACTACACT CAAGTATTAA GCCAATTACC TAAAAATCAT
GTTTTTGGTA GTGGAACAAA TTTAGATAGT TCAAGACTTA AGAAATTTTT AGCCAAAGAT
TTAAACATAA ATTCAAAAGA TATTTTTGCT TGTATGATTG GTGAACATGG AGATTCTCAG
TTTGCAGCAC TTTCTAATGC AAGCGTTTTA GGACAAAATT TATTAGATTT TTATAAGCAA
AAATTAGGCA AAGATTTAGA CATACAAGAA CTCGAAAAAG CCGTGATTAG CGAGGGATAT
TTCATCTATG AACGCAAAGG AAGAACAGAA TTTGGCATAG GAACTTCTTG TGTAAATTTG
GCCAAAGCCG TCCTAGAAGA TAGAAAAAGT TTACATCCTG TAAGTGTGGT TTTTGATGAT
ATAGCTTTTT CAATGCCCGC TATCATAGGA AAAGATGGTA TAGAAAAGGT TTTTGAATTA
AAATTCAATG AAAAAGAAAA AATAAAATTA GAAAATTCAA AACAACAAAT CAAAAACGCC
ATACAAAGCG TAAAAGATAA AATTTAA
|
|---|
| Protein sequence | MAKIGIVGLG YVGAASAYSI VTQGICSELY LYDIKQDLAL AHARDLEDMS AIHFSYTKIF
HVPNLENLAS CDIIILAFRK ESLKELPSRL VELQNNILEL KDIVLTLKNA NFKGKYIVAT
NPNDTITYYT QVLSQLPKNH VFGSGTNLDS SRLKKFLAKD LNINSKDIFA CMIGEHGDSQ
FAALSNASVL GQNLLDFYKQ KLGKDLDIQE LEKAVISEGY FIYERKGRTE FGIGTSCVNL
AKAVLEDRKS LHPVSVVFDD IAFSMPAIIG KDGIEKVFEL KFNEKEKIKL ENSKQQIKNA
IQSVKDKI
|
|---|
| |