Gene CJE1292 details

Gene Information

• Locus tag: CJE1292
• Symbol: rho
• ID: 3231799
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: +
• Start bp: 1209129
• End bp: 1210427
• Gene Length: 1299 bp
• Protein Length: 432 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637292646
• Product: transcription termination factor Rho
• Protein accession: YP_179280
• Protein GI: 57238031
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.345721
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAG AAAAAAAACA ACATCAAAGA ACCCACGTTC CAGTGGAAGG TTATAAAATC 
GAAGAATTAA AATTATTAGA TTTAGAAAAT CTAGTTAAAA TCGCCAATGA ATGTGAAATC 
GAAAACCCAA GAGAATTTCG CCGCCAAGAA CTTATTTTTG AAATTTTAAA AGCACAAACA 
AAAAAAGGCG GTTTTATACT TTTTACAGGG ATTTTAGAAA TTTCTTCCGA AGGTTATGGC 
TTTTTAAGAG GTATGGACTC TAATCTTAGC GATAGTGTTA ATGACGCTTA TGTTTCAAAT 
TCACAAATTA AAAAATTTGC TCTGCGTGTA GGCGATATCG TTACAGGACA AGTTAGAGAA 
CCAAAAGATC AAGAAAAATA CTACGCTCTT TTAAAAATCG AAGCGATCAA TTATCTGCCT 
TTACAAGAAG CCAAAGAAAG ACCTTTGTTT GATAACTTAA CCCCTATTTT TCCAACAGAA 
AAAATCAAAC TCGAATACGA TGCAATGAAG CTTACAGGTC GTGTTTTGGA TCTTTTTACT 
CCTATAGGAA AAGGACAACG CGGGCTTATC GTTGCTCCAC CACGCACAGG TAAAACAGAG 
CTTATGAAAG AACTTGCTAC TGCCATTGCA AAAAACCACC CAGAAATGCA TTTAATCGTA 
CTTTTAGTCG ATGAAAGGCC TGAAGAAGTT ACCGATATGC AAAGATGCGT AAAAGGGGAG 
GTTTTTAGTT CTACTTTTGA TTTACCTGCT TATAATCATG TGCGTGTAGC CGAACTCGTG 
ATAGAAAAAG CCAAAAGAAT GGTAGAAACA GGCAAAGATG TTATTATCTT ACTTGATAGT 
ATCACAAGAC TGGCACGTGC TTATAACACC GCAACTCCAA GCAGTGGAAA AGTCCTAAGC 
GGCGGGGTGG ATGCTAATGC CCTACACAAA CCAAAACGCT TCTTTGGTGC AGCTAGAAAT 
ATAGAAAATG GAGGCTCTTT AACCATAGTT GCTACAGCTT TAATTGATAC AGGTTCAAGA 
ATGGATGATG TGATTTTTGA AGAATTTAAA GGCACAGGAA ATAGCGAAAT AGTTCTTGAT 
AGAAATATCG CCGATAGAAG AATTTATCCT GCGATTAATA TCATCAAATC AGGAACAAGA 
AAAGAAGAAT TGCTCCAAGG CGTAGCAAAT CTTCAAAAAA TTTGGGCAAT CCGTTCAGCG 
ATTTCTCAAA TGGATGATGT TGAAGCGTTG AAATTTTTAT ATTCTAAAAT GCTTAAAACC 
AAAGACAATG TAGAACTTTT ATCTATAATG AACGAGTAG 

 

Protein sequence

MEKEKKQHQR THVPVEGYKI EELKLLDLEN LVKIANECEI ENPREFRRQE LIFEILKAQT 
KKGGFILFTG ILEISSEGYG FLRGMDSNLS DSVNDAYVSN SQIKKFALRV GDIVTGQVRE 
PKDQEKYYAL LKIEAINYLP LQEAKERPLF DNLTPIFPTE KIKLEYDAMK LTGRVLDLFT 
PIGKGQRGLI VAPPRTGKTE LMKELATAIA KNHPEMHLIV LLVDERPEEV TDMQRCVKGE 
VFSSTFDLPA YNHVRVAELV IEKAKRMVET GKDVIILLDS ITRLARAYNT ATPSSGKVLS 
GGVDANALHK PKRFFGAARN IENGGSLTIV ATALIDTGSR MDDVIFEEFK GTGNSEIVLD 
RNIADRRIYP AINIIKSGTR KEELLQGVAN LQKIWAIRSA ISQMDDVEAL KFLYSKMLKT 
KDNVELLSIM NE