Gene CJE1275 details

Gene Information

• Locus tag: CJE1275
• Symbol: waaC
• ID: 3231782
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: +
• Start bp: 1192544
• End bp: 1193572
• Gene Length: 1029 bp
• Protein Length: 342 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 637292629
• Product: lipopolysaccharide heptosyltransferase I
• Protein accession: YP_179263
• Protein GI: 57238014
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0859] ADP-heptose:LPS heptosyltransferase
• TIGRFAM ID: [TIGR02193] lipopolysaccharide heptosyltransferase I

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.336205
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAG CAATTGTTCG TTTGTCAGCA CTTGGTGATA TTATCCAAAG TGCCGTGGTT 
TTGCAATTTA TCAAAAATTT TAAAAAAGAT ATAGAAATTC ATTGGTTTGT AGATGAAAAA 
TTTGAAGGCA TACTTAAAAA CCATCCTTTA ATAGACAAAC TCTATGCCCT GCCCTTAAAA 
GACAAAAAAA TTTTAAAAAG CCTAAAAATT CTTCTTAAAG CAAGAAAAAA CAACTATAAT 
GCAGTAATAG ATCTACAAGG GCTTATAAAA TCTGCTATTG TAAGTCGAAT TTTAAGTAGA 
AATAATTTTG GTTTTGATAA AAATAGTCTT AAAGAAAGTT TTGCTCATAA TTTCTACAAC 
CAAAAACTTG AGTTAGATTA CAATGAAAAT GTATTTGTAA GATACTTAAG TCTTACCTCC 
TTTATGTTAA ATACTGATTT TAATGTCAAA AATTTAGCCT TTAAACAAGA TATTTTTAGC 
GTAGATGAAA ATTTAAAACA ATTCTTAAAC AATAAACTCA AGCTCGACAA AAACGAAAAA 
AACATACTCA TACACGTGGG TTCAAGTGTA GAAAATAAAA TCTATCCTAA AACCAAACTT 
GCTATACTTT GCAAACTTTT AATCAATGAA TTTCAACAAG CAAAAATTTG GCTCGCTTGG 
GGAAATGTAA AAGAATACGA ATTTGCCAAA GAGGTTTTAA ATCTTAGTGG TATTGATGAA 
ACACATATAG AATTAGCACC AAAATTCAGC CTTGAAGAGC TAATGGCTTT TACAAAAATG 
ATGAATCTTA TCATAGGAAA TGATAGTGGT CCAACACATT TGGCTTTTGC TTTAAATAAG 
GCATCTATTA CGATTTTTGG TGCAACACCA AGCTACCGCA ATGCTTTTCA AACTCATATC 
AATAAAATCA TTGATGCAGG TAAAAAAATC CAAAATGCCA AGCATATCGA TAAAAGTGAT 
TTTTGTATCA CGCGTATAGA AGAAGAAGAT ATCTTCAAAC TTGCCAAAGG CTTACTTAAT 
GAAAAATAG 

 

Protein sequence

MKIAIVRLSA LGDIIQSAVV LQFIKNFKKD IEIHWFVDEK FEGILKNHPL IDKLYALPLK 
DKKILKSLKI LLKARKNNYN AVIDLQGLIK SAIVSRILSR NNFGFDKNSL KESFAHNFYN 
QKLELDYNEN VFVRYLSLTS FMLNTDFNVK NLAFKQDIFS VDENLKQFLN NKLKLDKNEK 
NILIHVGSSV ENKIYPKTKL AILCKLLINE FQQAKIWLAW GNVKEYEFAK EVLNLSGIDE 
THIELAPKFS LEELMAFTKM MNLIIGNDSG PTHLAFALNK ASITIFGATP SYRNAFQTHI 
NKIIDAGKKI QNAKHIDKSD FCITRIEEED IFKLAKGLLN EK