| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1263 |
|---|
| Symbol | pglF |
|---|
| ID | 3231770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | - |
|---|
| Start bp | 1178378 |
|---|
| End bp | 1180150 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637292617 |
|---|
| Product | general glycosylation pathway protein |
|---|
| Protein accession | YP_179251 |
|---|
| Protein GI | 57238002 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTT ATAAAAGCAA AAGATTAGCA TTTTTTTTAA CTTCAGATAT TGTTTTAATT
TTACTTAGCG TTTATCTGGC TTTTTCTTTG AGATTTAGTG GAGATATTCC GAGTATTTTT
TATCATGGTA TGATGGTTTC TGCTATTATT TTGCTTGTTT TAAAACTTTC ATTTTTGTTT
GTTTTTAGAA TTTATAAAGT AGCTTGGAGA TTTTTTTCTC TCAATGAAGC AAGAAAGATT
TTTATCGCTT TGCTTTTAGC TGAGTTTTGT TTTTTTCTTA TTTTTTATTT TTTTAGTGAT
TTTTTTAATC CTTTTCCAAG AAGTGCTATT GTGATAGATT TTGTTCTTTC TTATATGTTT
ATAGGTACTT TAAGAATTAG CAAAAGAATG CTTGTGGATT TTAAACCTTC TAGAATGAAA
GAAGAAGAAA CTCCTTGTAT TGTAGTAGGG GCAACTTCTA AGGCTTTGCA TTTGTTAAAA
GGTGCAAAAG AAGGTTCTTT AGGGCTTTTT CCTGTAGGCG TAGTTGATGC GAGAAAAGAG
CTTATAGGGA CTTATTGTGA TAAATTTATT GTAGAAGAAA AAGAAAAAAT AAAATCTTAT
GTAGAACAAG GGGTAAAAAC TGCCATTATT GCTTTAAGAC TTGAGCAAGA AGAGCTTAAA
AAACTTTTTG AAGAACTTGT AGCTTATGGT ATTTGCGATG TAAAAATATT TTCTTTTACA
AGAAACGAAG CAAGAGATAT CAGTATAGAA GACTTGCTTG CTAGAAAACC AAAAGATTTA
GATGATAGTG CTGTGGCGGC TTTTTTAAAA GACAAGGTAG TTTTGGTAAG TGGAGCAGGT
GGAACTATAG GCAGTGAACT TTGTAAGCAA TGTATTAAAT TTGGTGCTAA GCATCTTATT
ATGGTTGATC ATAGTGAGTA TAATCTTTAT AAGATCAATG ATGATTTAAA TTTATATAAA
GAAAAAATTA CTCCTATTTT ACTGAGTATT TTAGATAAGC AAAGTTTAGA TGAGGTATTA
AAAACTTATA AACCTGAGCT TATTTTACAT GCAGCCGCTT ATAAACATGT GCCTCTTTGT
GAACAAAATC CACATTCAGC AGTAATCAAT AATATTTTAG GAACTAAAAT TTTATGCGAC
AGTGCTAAAG AAAATAAAGT AGCTAAATTT GTGATGATAA GTACAGATAA AGCAGTGCGA
CCAACAAATA TTATGGGTTG CACTAAAAGA GTTTGTGAGC TTTATACTTT AAGTATGAGT
GATGAAAATT TTGAAGTTGC TTGTGTGCGT TTTGGTAATG TTTTAGGTTC TAGTGGTAGT
GTGATACCGA AATTTAAAGC ACAAATTGCC AATAATGAGC CTTTAACTTT AACGCACCCT
GATATAGTGC GTTATTTTAT GCTTGTGGCT GAGGCAGTGC AACTTGTTTT ACAAGCTGGA
GCTATCGCAA AAGGGGGAGA ACTTTTTGTT TTGGATATGG GTAAGCCTGT GAAAATCATA
GATTTAGCTA AAAAAATGCT TTTACTTTCT AATCGCAATG ATTTAGAAAT TAAAATCACA
GGCTTAAGAA AAGGTGAGAA GCTTTATGAA GAGCTTTTGA TTGATGAAAA TGATGCTAAA
ACGCAATATG AGAGTATTTT TGTAGCAAAG AATGAGAAGG TTGATCTTGA TTGGCTTAAT
AAAGAGATAG AAAATTTACA AATATGTGAA GATATTTCAG AGGCTTTATT AAAGATTGTA
CCTGAATTTA AACACAATAA AGAAGGTGTA TAA
|
|---|
| Protein sequence | MIFYKSKRLA FFLTSDIVLI LLSVYLAFSL RFSGDIPSIF YHGMMVSAII LLVLKLSFLF
VFRIYKVAWR FFSLNEARKI FIALLLAEFC FFLIFYFFSD FFNPFPRSAI VIDFVLSYMF
IGTLRISKRM LVDFKPSRMK EEETPCIVVG ATSKALHLLK GAKEGSLGLF PVGVVDARKE
LIGTYCDKFI VEEKEKIKSY VEQGVKTAII ALRLEQEELK KLFEELVAYG ICDVKIFSFT
RNEARDISIE DLLARKPKDL DDSAVAAFLK DKVVLVSGAG GTIGSELCKQ CIKFGAKHLI
MVDHSEYNLY KINDDLNLYK EKITPILLSI LDKQSLDEVL KTYKPELILH AAAYKHVPLC
EQNPHSAVIN NILGTKILCD SAKENKVAKF VMISTDKAVR PTNIMGCTKR VCELYTLSMS
DENFEVACVR FGNVLGSSGS VIPKFKAQIA NNEPLTLTHP DIVRYFMLVA EAVQLVLQAG
AIAKGGELFV LDMGKPVKII DLAKKMLLLS NRNDLEIKIT GLRKGEKLYE ELLIDENDAK
TQYESIFVAK NEKVDLDWLN KEIENLQICE DISEALLKIV PEFKHNKEGV
|
|---|
| |