| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1245 |
|---|
| Symbol | truB |
|---|
| ID | 3231752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | + |
|---|
| Start bp | 1163646 |
|---|
| End bp | 1164464 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 637292599 |
|---|
| Product | tRNA pseudouridine synthase B |
|---|
| Protein accession | YP_179233 |
|---|
| Protein GI | 57237984 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0130] Pseudouridine synthase |
|---|
| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.478326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA TCTTTGCAGC CTTTAAACCA AAGGGTTTGA GTTCTAATGC CTTTTTAAGT
ACTTTAAAGA AAAAATATAA AAATAAAAAA GCAGGATATT CTGGCACTCT TGATCCTTTC
GCCAAAGGGG TTTTAATCGT TGCATTTGGA CAATACACAA AACTTTTCCG TTTTTTAAAA
AAAACCCCAA AAACCTATAA AGCTACTTTA TGGCTTGGAG TTTACTCCTT AAGTCTTGAT
GATCAAAATA TAAAAGAAAT TCAAAATATA AAAGAATTTG ATCTTGCAAA TTTAAAACAA
ATCATTGATC AAATGCAAGG AATTATCTCC TATACACCAC CTCAATTTAG CGCCAAAAGA
ATCAATGGAA CTCGCGCCTA TGAACTTGCA AAAAAAGGTA TAGAAGCAAA TTTAAAACCT
TGTCAAATGG AAGTATTTGA TTGTAAGATC TTAAGCTATA ATCATCCTTT TTTAAATATT
GAAATCACAG TCAGTGAAGG TGCTTACATA AGATCTTATT GTGAACTTTT TGCTAGAAAA
CTAGGTATTA ATGCGACTTT AAGCTCTTTA GAGCGCATTA AAGAAGGCAA ATTTGTTTAT
AATAATGAGA AAAGCTTAAA TGTGTTAAAA TACATTAACC TAAAGCCAAA TTTTATCAAG
GATTTAAATA AACTCGAAAA TGGTGCTAAA ATTTTTGTCG AAGAATTAGA ATTTCATGAT
GAAGGAGATT ATTATATTGA AACAGAAAAA TATTTTAGCA TAATTAATAT TAAAGAAAAT
ACAGTAAAAT ATCTTCTAAA TAAGGTTGAA AAATGTTAA
|
|---|
| Protein sequence | MNKIFAAFKP KGLSSNAFLS TLKKKYKNKK AGYSGTLDPF AKGVLIVAFG QYTKLFRFLK
KTPKTYKATL WLGVYSLSLD DQNIKEIQNI KEFDLANLKQ IIDQMQGIIS YTPPQFSAKR
INGTRAYELA KKGIEANLKP CQMEVFDCKI LSYNHPFLNI EITVSEGAYI RSYCELFARK
LGINATLSSL ERIKEGKFVY NNEKSLNVLK YINLKPNFIK DLNKLENGAK IFVEELEFHD
EGDYYIETEK YFSIINIKEN TVKYLLNKVE KC
|
|---|
| |