Gene CJE1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJE1242 
SymbolpepF 
ID3231749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni RM1221 
KingdomBacteria 
Replicon accessionNC_003912 
Strand
Start bp1159425 
End bp1161146 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content29% 
IMG OID637292596 
Productoligoendopeptidase F 
Protein accessionYP_179230 
Protein GI57237981 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1164] Oligoendopeptidase F 
TIGRFAM ID[TIGR02290] oligoendopeptidase, pepF/M3 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.906065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAAT GGGATTTAAG TGCTTTATTT CACGATAAAG AAGCGTTGCA AAATTTTACA 
CAAGATCAAA TCCAACAAAG TTTAAATTTC AAAAAAAACT ATGAAAATAA ACTTTATACA
TTAAATGCTA ATGAGTTTTT ACAAGCTTTA AAAGATTATG AAATTTTAAA TCAAGCTCTT
GGCAAAATCA TGACTTATAC TTATTTGCTT TTTGCTAAAA ACACTCAAAA TGGTTCTTTT
TACGCACAAT ACGAAGAAGA ATGCAAAAAA ATAGAAGAAA ATTTACTCTT TTTCGAGCTT
GAATTTTGCG AGTTAGCTCC TGAGAAAAGT CAAAAATTTA CAACTTTTTG CAAAGATTAT
GATTTTTATC TTTCTAATTT ATTGCAAAAC AAACGCTATA ATCTTAGCAA AAACGAAGAA
CGCATTATGC TCTATCTTTC CAATACAGGT GCAAATGCTT TTAGTAGACT TTTTGATGAA
AGTATGAGCG CTTTAAAAAT CCCTTTTGAA GGTAAAAAAC TTAGCGAAGA AGAAGTTCTA
AGCAAAATGT ATGATGAAGA TAGAAAAATA CGCAAAAAAG CTGCTAAAAA ATTCAGTAAA
GTTTTGCAAA AAAATAGCAG ACTTTTAAGT TTTATTATCA ATATGATAAA AACAGAAAGA
AAAAACATAA GCTTATTAAG AGGTTATGAA AATACTGAAA TTTCAAGACA TATCAGCAAT
CAAATTTCAC AAAAAAGCGT TGATTCTTTG ATAGCAAGTG CGCAAAAACA TTTTAACTTA
GTATCGCAAT TTTACAAAAG AAAAAAACAA ATTTTAGGCT ATGATGAGCT TAAAGACTAT
GACAGATATG CACCCATAGG AAAAGAAGCA AGTTTTGATT TTAAAACAAG TAAAAATATT
GTTTTAGAGG CATTTCAAGC TTTTTCTCCT CAATTTTATG ATATAGCAAA AAATGCTTTT
GATCAAGGTT GGATTGATGT TTATCCGCAA GAAAATAAAC AAGGGGGTGC TTTTTCGCAT
TCTGCAACTT CTGATGCACA TCCTTTTGTT TTATTAAACT ACACCAATAA AAGACGCGAT
CTTTTTACAC TTGCACATGA ATTAGGACAC ACTATCCATC AAAAACTTTC TTATAATGTA
AGCTATTTAA ATCAAAACAC GCCTTTAACC ACCGCAGAAA CAGCTTCAGT TTTTGCCGAA
ATGCTCGTAT TTGATTTTAT TAAAGATAAG TTAAAAAAAG AAGAACTCTT ATCTTTATAT
GCAAATAAAA TCGAAGATAT TTTTGCAACT TTTTATAGAC AGATTAATTT TACTTGTTTT
GAAAGACGCT TACATGCTCA AGAAAATGAA CTTAGCACCG AAGAAATCAA TAAAATTTGG
ATGGAAGAAT CTCAAAAGAT GTTTCAAGAC AGCGTAAAAC TTACAAAAAA TTATGCTTCT
TGGTGGAGTT ATATTCCTCA TTTTATCCAT TCTCCTTTCT ACTGCTATGC TTATGCTTAT
GCACAACTTT TAGTTTTAGC TCTTTATGGA CTTTACAAAA GTAAAAAATG TGAAAATTTT
AAAGAACTTT ATATCAAAAT GCTTTCTTTA GGCGGAAGTG TGAGTCCAAA AGAACTAGTA
GGAATGTTTG GCTTTGATAT AGAAGATGAA AATTTTTGGG AAATAGGCAT AAAAGAAATT
CAAAAACTCA TCAATGAATT TATGGAGTTA CAATCATGCT AG
 
Protein sequence
MLEWDLSALF HDKEALQNFT QDQIQQSLNF KKNYENKLYT LNANEFLQAL KDYEILNQAL 
GKIMTYTYLL FAKNTQNGSF YAQYEEECKK IEENLLFFEL EFCELAPEKS QKFTTFCKDY
DFYLSNLLQN KRYNLSKNEE RIMLYLSNTG ANAFSRLFDE SMSALKIPFE GKKLSEEEVL
SKMYDEDRKI RKKAAKKFSK VLQKNSRLLS FIINMIKTER KNISLLRGYE NTEISRHISN
QISQKSVDSL IASAQKHFNL VSQFYKRKKQ ILGYDELKDY DRYAPIGKEA SFDFKTSKNI
VLEAFQAFSP QFYDIAKNAF DQGWIDVYPQ ENKQGGAFSH SATSDAHPFV LLNYTNKRRD
LFTLAHELGH TIHQKLSYNV SYLNQNTPLT TAETASVFAE MLVFDFIKDK LKKEELLSLY
ANKIEDIFAT FYRQINFTCF ERRLHAQENE LSTEEINKIW MEESQKMFQD SVKLTKNYAS
WWSYIPHFIH SPFYCYAYAY AQLLVLALYG LYKSKKCENF KELYIKMLSL GGSVSPKELV
GMFGFDIEDE NFWEIGIKEI QKLINEFMEL QSC