Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE1242 |
Symbol | pepF |
ID | 3231749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 1159425 |
End bp | 1161146 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637292596 |
Product | oligoendopeptidase F |
Protein accession | YP_179230 |
Protein GI | 57237981 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1164] Oligoendopeptidase F |
TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.906065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAAT GGGATTTAAG TGCTTTATTT CACGATAAAG AAGCGTTGCA AAATTTTACA CAAGATCAAA TCCAACAAAG TTTAAATTTC AAAAAAAACT ATGAAAATAA ACTTTATACA TTAAATGCTA ATGAGTTTTT ACAAGCTTTA AAAGATTATG AAATTTTAAA TCAAGCTCTT GGCAAAATCA TGACTTATAC TTATTTGCTT TTTGCTAAAA ACACTCAAAA TGGTTCTTTT TACGCACAAT ACGAAGAAGA ATGCAAAAAA ATAGAAGAAA ATTTACTCTT TTTCGAGCTT GAATTTTGCG AGTTAGCTCC TGAGAAAAGT CAAAAATTTA CAACTTTTTG CAAAGATTAT GATTTTTATC TTTCTAATTT ATTGCAAAAC AAACGCTATA ATCTTAGCAA AAACGAAGAA CGCATTATGC TCTATCTTTC CAATACAGGT GCAAATGCTT TTAGTAGACT TTTTGATGAA AGTATGAGCG CTTTAAAAAT CCCTTTTGAA GGTAAAAAAC TTAGCGAAGA AGAAGTTCTA AGCAAAATGT ATGATGAAGA TAGAAAAATA CGCAAAAAAG CTGCTAAAAA ATTCAGTAAA GTTTTGCAAA AAAATAGCAG ACTTTTAAGT TTTATTATCA ATATGATAAA AACAGAAAGA AAAAACATAA GCTTATTAAG AGGTTATGAA AATACTGAAA TTTCAAGACA TATCAGCAAT CAAATTTCAC AAAAAAGCGT TGATTCTTTG ATAGCAAGTG CGCAAAAACA TTTTAACTTA GTATCGCAAT TTTACAAAAG AAAAAAACAA ATTTTAGGCT ATGATGAGCT TAAAGACTAT GACAGATATG CACCCATAGG AAAAGAAGCA AGTTTTGATT TTAAAACAAG TAAAAATATT GTTTTAGAGG CATTTCAAGC TTTTTCTCCT CAATTTTATG ATATAGCAAA AAATGCTTTT GATCAAGGTT GGATTGATGT TTATCCGCAA GAAAATAAAC AAGGGGGTGC TTTTTCGCAT TCTGCAACTT CTGATGCACA TCCTTTTGTT TTATTAAACT ACACCAATAA AAGACGCGAT CTTTTTACAC TTGCACATGA ATTAGGACAC ACTATCCATC AAAAACTTTC TTATAATGTA AGCTATTTAA ATCAAAACAC GCCTTTAACC ACCGCAGAAA CAGCTTCAGT TTTTGCCGAA ATGCTCGTAT TTGATTTTAT TAAAGATAAG TTAAAAAAAG AAGAACTCTT ATCTTTATAT GCAAATAAAA TCGAAGATAT TTTTGCAACT TTTTATAGAC AGATTAATTT TACTTGTTTT GAAAGACGCT TACATGCTCA AGAAAATGAA CTTAGCACCG AAGAAATCAA TAAAATTTGG ATGGAAGAAT CTCAAAAGAT GTTTCAAGAC AGCGTAAAAC TTACAAAAAA TTATGCTTCT TGGTGGAGTT ATATTCCTCA TTTTATCCAT TCTCCTTTCT ACTGCTATGC TTATGCTTAT GCACAACTTT TAGTTTTAGC TCTTTATGGA CTTTACAAAA GTAAAAAATG TGAAAATTTT AAAGAACTTT ATATCAAAAT GCTTTCTTTA GGCGGAAGTG TGAGTCCAAA AGAACTAGTA GGAATGTTTG GCTTTGATAT AGAAGATGAA AATTTTTGGG AAATAGGCAT AAAAGAAATT CAAAAACTCA TCAATGAATT TATGGAGTTA CAATCATGCT AG
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Protein sequence | MLEWDLSALF HDKEALQNFT QDQIQQSLNF KKNYENKLYT LNANEFLQAL KDYEILNQAL GKIMTYTYLL FAKNTQNGSF YAQYEEECKK IEENLLFFEL EFCELAPEKS QKFTTFCKDY DFYLSNLLQN KRYNLSKNEE RIMLYLSNTG ANAFSRLFDE SMSALKIPFE GKKLSEEEVL SKMYDEDRKI RKKAAKKFSK VLQKNSRLLS FIINMIKTER KNISLLRGYE NTEISRHISN QISQKSVDSL IASAQKHFNL VSQFYKRKKQ ILGYDELKDY DRYAPIGKEA SFDFKTSKNI VLEAFQAFSP QFYDIAKNAF DQGWIDVYPQ ENKQGGAFSH SATSDAHPFV LLNYTNKRRD LFTLAHELGH TIHQKLSYNV SYLNQNTPLT TAETASVFAE MLVFDFIKDK LKKEELLSLY ANKIEDIFAT FYRQINFTCF ERRLHAQENE LSTEEINKIW MEESQKMFQD SVKLTKNYAS WWSYIPHFIH SPFYCYAYAY AQLLVLALYG LYKSKKCENF KELYIKMLSL GGSVSPKELV GMFGFDIEDE NFWEIGIKEI QKLINEFMEL QSC
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