| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1236 |
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| Symbol | secD |
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| ID | 3231743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni RM1221 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003912 |
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| Strand | - |
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| Start bp | 1152585 |
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| End bp | 1154165 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637292590 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_179224 |
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| Protein GI | 57237975 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.543695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAATT CTAAAATCAA TTATCGCTTG ATTATTTTTA TGGCGGTATT TATTTTTGGA
GTGGCTTTTT CACTCCCTTC TTTTTTGCAG TCAGAACGTG GTGCGAAGAT TAATTTAGGG
CTTGATTTGC AAGGTGGGCT TTATATGCTC TTAGGTGTAG ATAATGAAGA AGCTGTAAAA
TCTAAAATAA AATCAATTGC ATCTTCATTG AGTTATTCTT TTAATAAAGA AAATATTTTA
AATGATGGCT TAAATATCCA TGATGATATT TTAGAATTTA CTTTGCTTGA TAATGCAGAT
ATTGCAAAAG TCGAAAATTT GCTTAAAGAA ATAAAAGGAA TTAATATACA AAGTGAAAAT
ATGCACTATA AAATTTCTTT TACCTCAGAA GAAGTAAAAA ATATAGAAAA TTTTGCACTT
TTGCAAGCAG TTGAAACCAT AAGAAATAGG CTTGATCAAT TTGGTTTAGC AGAGCCAACA
GTTGCTAAAC AAGGTGATGA TAAGATTTTG GTTGAACTTG CAGGGATTAA AACCAAAGAA
GATGAACTAA GAGCAAAAGA ACGCATCACA AAAGCAGCAC ATTTGCAACT TATGGAAGTT
GATGATTCTA AAATGGGTCA AGCTTCTACA ATGAGCGATG CTGAGGCTGC GAGTTATGGA
CTGATTTTAG TGCCTGATTC TAGAAATCCA AATTTAAAAT ATACCTTAAA AAGTATACCT
ATTTTAGATG GATCTATGCT TACTGATGCT AGAGTAGGGA TTAGTGATAA GAGTAATTAT
CCTGTGATTA ATTTTACTTT AAATGCCGAG GGTTCTAAAA AATTTGCTGA TTATACAGGA
GCAAATGTTG GAAAGCGTCT TGCTATTGTA CTTGATAATA AAGTATATTC TGCTCCATCT
ATCAATGAAC GCATAGGTGG AGGTAGTGGG CAAATCAGTG GAGCTTTTAC TCAAGAAGAA
GCACGCGATG TGGCGGTAGC TTTAAGAAGT GGAGCTTTGC TTGCGCCTGT AAAATTACTT
GAACAAAGAA GCATAGGACC ATCTTTAGGT GCTGATAGTA TTAAAATGAG TATGATAGCC
TTAATCGGTG CATCGGTTTT TATTGTAGTA TTTATGATGA TGTATTACGG TGTGGCAGGA
ATTTTTGCAA ATATTGCAAT GCTAGTTAAT GTTTTGGTAG TAGTTGCCGT TATGGCTATG
TTTGGAGCAA CTTTAACTTT ACCAGGGATG GCAGGACTTG TTTTAACTGT GGGTATGGCA
GTAGATGCAA ATGTGATTAT CAATGAGCGC ATACGAGAAC TCTTGCGAGA TGGAGTAAAT
ATAAGAGCTA GCATAGAACA AGGTTATAAA AATGCTATGA GTGCGATTAT AGATTCAAAT
ATCACTTCTT TGGTTACTTC GGTAGCACTT TATGCTTATG GAACAGGAGC AGTTAAAGGT
TTTGCTGTGA CTTTGGGAAT TGGTATCGTT GTTTCTATGA TTACAGCTAT TTTGGGAACT
CATGGAATGT TTGATTATTT TATGCAACGC ATAGAAAAAA GTAATAATAC AAGATTTTGG
TTTGGCTATA GGAGAAGATA A
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| Protein sequence | MRNSKINYRL IIFMAVFIFG VAFSLPSFLQ SERGAKINLG LDLQGGLYML LGVDNEEAVK
SKIKSIASSL SYSFNKENIL NDGLNIHDDI LEFTLLDNAD IAKVENLLKE IKGINIQSEN
MHYKISFTSE EVKNIENFAL LQAVETIRNR LDQFGLAEPT VAKQGDDKIL VELAGIKTKE
DELRAKERIT KAAHLQLMEV DDSKMGQAST MSDAEAASYG LILVPDSRNP NLKYTLKSIP
ILDGSMLTDA RVGISDKSNY PVINFTLNAE GSKKFADYTG ANVGKRLAIV LDNKVYSAPS
INERIGGGSG QISGAFTQEE ARDVAVALRS GALLAPVKLL EQRSIGPSLG ADSIKMSMIA
LIGASVFIVV FMMMYYGVAG IFANIAMLVN VLVVVAVMAM FGATLTLPGM AGLVLTVGMA
VDANVIINER IRELLRDGVN IRASIEQGYK NAMSAIIDSN ITSLVTSVAL YAYGTGAVKG
FAVTLGIGIV VSMITAILGT HGMFDYFMQR IEKSNNTRFW FGYRRR
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