Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE1217 |
Symbol | |
ID | 3231724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | - |
Start bp | 1135162 |
End bp | 1135809 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637292571 |
Product | putative lipoprotein |
Protein accession | YP_179205 |
Protein GI | 57237956 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.426628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG GTATTTTTTT ATTGGTTTTT TTAAGTGTTT TTTTTAGTGC GTGTAGTACG AAAAATGATG AAGGTTTATA CAATCTTAGT GCTAGTGAGT GGTATAAGCA AATTATTAAA GATTTGCAGG ACAAGGATTT GGAAAAAGCT GATGATCATT ATAATGGTAT GGCAAGTGAG CATGTTGCCG ATCCTTTATT GGAAACTACT TTAATTATTT TAGCACAAGC TCATATGGAT GAAGAGGAAT ATAAGTTAGC TGAATTTTAT TTAGATGAAT ATAATAAAAA ATTTGGAAAT TCACGCAATG CTGATTATAT TCGTTATCTT AAAATTAAGG CAAAATTTGA TGCATTTGCA GTGCCAAATC GTAATCAGGC GTTAATGCTT GAAAGCCAAA AAGAAATAGA TACTTTTTTG AAAGATTATC CTTATACAAA ATATGAACCT TTGGTTCAAA CAATGCTTAC AAAATTTAAT TTAGCGGTTT TTTATCTTAA TAGTACTATA GAAAATCTAT ACCAGCGCAT AGGGCATGAT GAAAGTGCAC AAATTTATAA ACAAAGACTT CAAGAAAGTG AATTTTATCA GCAAAGTATT ATCAAACCTG AGCTTCCTTG GTATAGAAGT ATATTTGAAA GATTTTAA
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Protein sequence | MKKGIFLLVF LSVFFSACST KNDEGLYNLS ASEWYKQIIK DLQDKDLEKA DDHYNGMASE HVADPLLETT LIILAQAHMD EEEYKLAEFY LDEYNKKFGN SRNADYIRYL KIKAKFDAFA VPNRNQALML ESQKEIDTFL KDYPYTKYEP LVQTMLTKFN LAVFYLNSTI ENLYQRIGHD ESAQIYKQRL QESEFYQQSI IKPELPWYRS IFERF
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