| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1196 |
|---|
| Symbol | mutS |
|---|
| ID | 3231705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | - |
|---|
| Start bp | 1115291 |
|---|
| End bp | 1117498 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637292552 |
|---|
| Product | recombination and DNA strand exchange inhibitor protein |
|---|
| Protein accession | YP_179186 |
|---|
| Protein GI | 57237938 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01069] MutS2 family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATA CAAAAGAAGA ATTGATCTCA AAGCTTGATT TAAACAGCTA TTTAGAAGAG
TTTAAAGCCC TTTTTGCAAG AGATAAGGAG ATTTTTTTGC AAGGAGATTC TAATCTTCAT
TTTAAACGTA TACATGAGCT TTGCGAGGTG GAATTTCCTA CTATACCAGA GCTTAGCAAT
CTTGATAAAG CCTTGGTTCA TTTAAGTAAG CAAGGAATTT TACATTTAGA TGAAATTTTT
GAATTTGTAA AAATTTTTCG TTATTTTGAA AAGTTAAAAA AAATAAAACT AGGAACAAAT
TTAGACTCTT GGCTACAAAA GATAGAATTT GTTAGCGGGG CTTTGGAGCT TTGTTTGAAT
TTCGATGAGA AAGGAGAATT AAAAGAAAGT TTAGATGAAA GACTTGTAAA TCTTAATGCC
GCTTTAAGAT TGAAAAACGA AAGCATAATA GCTGAGTTTA AGAAATTTTG TTATACAAAA
GCTTTGATGC CTTATCTTAT CGATACACAA ATCCATCTTA TAAACAATCT TGAAGCCTTG
CTTGTAAGAG GTGGGTTTAA TCACGCCATT AAAGCAAAAA TCATAGGTAG AAGTAGTGGC
GGTGGCTTTT ATATCGTGCC TTTAAGTGTT GAAAATTTGC AAAATGATAT AGAAAAAATC
AAAAATCAAA AAGAAGAAAT TTATTATGAA TACGCTAAAA ATTTCTCAGC TTTTTTAGCA
AAAAACCTAC CTTTTTTAAA ATTTATCAAT ACAGCCTTTG ATCTTTTTGA TCATTATAGT
GCTAGGGTTT TGCTTGCTAA AAAAAAGGAT TTTGAATTTG TTTTGTGTGA TCAAAGTACA
GATTTAGTGC TTAAAAATTT CGCTCATCCT GCCTTAAAAA ATCCAAAAAG CGTGAGTTTG
GAATTTAAAA AACAAGTTTT AATCATCACA GGGGTAAATG CAGGCGGAAA ATCCATGCTT
TTAAAATCCA TGCTAAGCGC AGCATTTTTA GCTAAACATC TTTTGCCTAT GCATATCAAA
GCAAGTGAAA GTAAAATTGG TACTTTTAAA GAATTTGATG CCATCATAGA AGATCCGCAA
AATGTTAAAA ACGACATTTC AACTTTTGCA GGAAGAATGT TGCATTTTTC TAGACTTTTT
TCTAAGAAAA ATTTGCTTTT AGGTATCGAT GAAATAGAGC TTGGAACAGA TTTTGAAGAA
GCGGCTTGTT TGTATAGTGT GTTAATTTCA AAACTCATAG CTAATAATCT TAAAATCATC
ATCACCACGC ACCACAAACG CCTTGCTATG CTTTTAGCAA AGAATGAGCA AGTTGAACTC
ATTGCTGCTT TATATGATGA AGAGCTTTCA CGCCCAAAAT ACGAGTTTTT AAAAGGCACC
ATAGGAAAAT CTTATGCCTT TGAAACCGCT TTGCGTTATC AGATTCCGCC GAATTTAGTT
GGCGAGGCTA AAAAGCTTTA TGGCGAGGAT AAAGAAAATT TAGAAGAGCT TGTGGGTAAA
AATATCAATC TTGAATTAGA ACTAAAAGCT AAGCTTGAAA ATGTCGAGAA AAAAGAGCAA
AAAGTCGATG AAATTTTACT TTCCTTAAAA GAGCAAAAAG AAAAAAATGA ACAAGAATTT
CGTACGAGTT TGAGAAATTT AGAATTTAAA TTTCACAAAG CCATAGAAGA AGCTAAAAAA
ACCATACAGC TTAAAGATAT GAAAGACAAG CAAAGAAGTC TTAATAAAGC CAATGAACTT
AAAAAAGAAA TCATCTTGCC AAGTATGGAG CAAAACGAAG AATTGCGTGT GGGGGATTTT
GTAAAATATG AAAAAATTAA GGGTAAAATC ATAAGCATTT CTAAAAACGA TGCTATGGTT
GAAAGTGATG GGATCAAACT TCGTGTGCCT TTAAAACTGC TTAAAAAAAG CACTCCTACA
CCTAAAATAA GTCCAAAAAC AAGTATTAGT GTAACAAAAC CTAGCAATCT AAGCGTGAGT
TTGGATTTGC ATGGACTTAG GAGTGATGAA GCTATTTCAA GGCTTGATAA ATTTATTTCA
GATGCTTTGC TTGCAGGCTT TGATGAAGTT TTAGTTTACC ATGGTATAGG AACAGGAAAG
CTTGCCTTTG CTGTAAGAGA GTTTTTGAAA ACTCATAAAA GTGTCAAGGG CTTTAATGAC
GCACCGATCA ATCAAGGTGG CTTTGGTGCT AAGGTGGTGA GATTATAA
|
|---|
| Protein sequence | MNDTKEELIS KLDLNSYLEE FKALFARDKE IFLQGDSNLH FKRIHELCEV EFPTIPELSN
LDKALVHLSK QGILHLDEIF EFVKIFRYFE KLKKIKLGTN LDSWLQKIEF VSGALELCLN
FDEKGELKES LDERLVNLNA ALRLKNESII AEFKKFCYTK ALMPYLIDTQ IHLINNLEAL
LVRGGFNHAI KAKIIGRSSG GGFYIVPLSV ENLQNDIEKI KNQKEEIYYE YAKNFSAFLA
KNLPFLKFIN TAFDLFDHYS ARVLLAKKKD FEFVLCDQST DLVLKNFAHP ALKNPKSVSL
EFKKQVLIIT GVNAGGKSML LKSMLSAAFL AKHLLPMHIK ASESKIGTFK EFDAIIEDPQ
NVKNDISTFA GRMLHFSRLF SKKNLLLGID EIELGTDFEE AACLYSVLIS KLIANNLKII
ITTHHKRLAM LLAKNEQVEL IAALYDEELS RPKYEFLKGT IGKSYAFETA LRYQIPPNLV
GEAKKLYGED KENLEELVGK NINLELELKA KLENVEKKEQ KVDEILLSLK EQKEKNEQEF
RTSLRNLEFK FHKAIEEAKK TIQLKDMKDK QRSLNKANEL KKEIILPSME QNEELRVGDF
VKYEKIKGKI ISISKNDAMV ESDGIKLRVP LKLLKKSTPT PKISPKTSIS VTKPSNLSVS
LDLHGLRSDE AISRLDKFIS DALLAGFDEV LVYHGIGTGK LAFAVREFLK THKSVKGFND
APINQGGFGA KVVRL
|
|---|
| |