Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE1161 |
Symbol | livH |
ID | 3231670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | - |
Start bp | 1078104 |
End bp | 1079000 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637292518 |
Product | high affinity branched-chain amino acid ABC transporter, permease protein |
Protein accession | YP_179152 |
Protein GI | 57237904 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCTA CTTTATTTTT ACAACAACTT GTTAATGGAC TTAGTTTAGG CAGTATGTAT GCCCTTATTG CTGTTGGCTA TACTATGGTT TATGGCGTGT TAAGACTTAT TAATTTTGCT CACGGCGATA TTATGATGGT TGGTGCTTAT GCGGCTCTTT TTTGCATGAC TAATCTAAAT GTTCCTTTTC TAGGAGCTTT GTCTTTAGCA ATGATTTTTG CTGCTTGTGT TGGAATAGCT ACAGATAGAA TCGCTTATAA ACCTTTAAGA CAGGCTCCTA GAATTTCATT GTTGATTACA GCAATCGGTA TTAGTTTTTT CTTGCAAAAT CTTTTTAATA TGCTTTTTAC TTCAACACCT AGAACTTTTA CACCGCCAAG TTATTTTGAG GAAAGTGTTA ATTTTGGTGG AGTGATAACA ACTTATGGTT CTTTAATGGT TCCTGCTCTT ACATTTGTTA TTTTAATAGC AGTGTTATGG ATTTTGTATA AAAGCAAATA TGGTATAGCT ATTCGTGCTT TGGCATTTGA TATACAAACA GTAAATTTAA TGGGTATAGA TGCAAATCGT ATTATTGCTA TAGTTTTTGC CCTAGGTTCA GCTTTGGCAG CAGTTGGGGG TGTTTTTTGG GCTGCAAATT ATTACTCTGT TGAACCTACT ATGGGAACTT TAATAGGTTT AAAAGCTTTT GCTGCTGCAG TTTTAGGAGG TATAGGTTCT GTAGTAGGTG CAGTTTTGGG TGGACTTATT ATAGGATTTA CTGAAGTTGT TGTTGTGGCT TTTTTTCCAG ATTTATCAGG CTTTAAAGAT GCATTTGCTT TTATTTTTTT GGTGTTTATA TTGTTATTTA GGCCTACGGG AATTTTAGGT ATAAATTTTG AAAAGAGTAG GTTTTAA
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Protein sequence | MDSTLFLQQL VNGLSLGSMY ALIAVGYTMV YGVLRLINFA HGDIMMVGAY AALFCMTNLN VPFLGALSLA MIFAACVGIA TDRIAYKPLR QAPRISLLIT AIGISFFLQN LFNMLFTSTP RTFTPPSYFE ESVNFGGVIT TYGSLMVPAL TFVILIAVLW ILYKSKYGIA IRALAFDIQT VNLMGIDANR IIAIVFALGS ALAAVGGVFW AANYYSVEPT MGTLIGLKAF AAAVLGGIGS VVGAVLGGLI IGFTEVVVVA FFPDLSGFKD AFAFIFLVFI LLFRPTGILG INFEKSRF
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