| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1089 |
|---|
| Symbol | |
|---|
| ID | 3231598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | - |
|---|
| Start bp | 1017649 |
|---|
| End bp | 1019049 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 637292447 |
|---|
| Product | TrkA domain-containing protein |
|---|
| Protein accession | YP_179082 |
|---|
| Protein GI | 57237834 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3400] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.273971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATA TTTTAATTAT AATAGATGGT ATTTTAGCAA AGCATTTCTT AGAAAGGCTT
TGTTTTGAAA AAGGCTTAGG TTACTTTTTT ACAGTAGTGT GTCAAAATAG TGAAAAAAAT
AACTTAAATA TTTCTAGTGA GTATATTGAC TTGCATTATT TTGATCCTAC AAGCACAGCG
CGTCTTGAAA ATATTATAAG TAAAGATTTT AAACAGGCTT TTATTTATAT GCAAGATGAA
TTTGAAACTA AAAAAAGTTA TGAGGCTTTG CGTTCTTTAA ATCCAAATTT AGAAATAGAA
ATAATGGATT TTTGGGGGTT AAGTGTTAAT GATACTCATG CAAATTTAGC TGATGCTAGA
ATGACTTTAA GCCGTAGATT TATGGATTTT TTACCAGATA TTGCTTTAAC AGCTCAGTAT
ATAGGACTTG GGGTTGGAGA GATTATGGAA GTAAAAATTC CAGCAGGGTC TATTTTTGCT
TATAGGCACA TAAGTTCAAT ACAACAAAAA AGGTGGCGCA TAGTCCTTAT TTATAGAAAT
TCTAAGATTT ATTTTGTAAA ACCATCTTTT GTTTTAGAGC CAAATGATAG CATTTTGATC
GTTGGAGATC CTGTTGTTTT ACAAAGTATT TTTCATAATA TAAGAGGCAA AGCAGGGCAA
TTTCCTATGC CTTTTGGAAG TAATGTTTTT GCTTTAATTG ATATGAAAAA TATGAATCAA
AATATGCAAG AAAGAGTGCT TGATACTACT TTAAAATTAA CTCAAAAAAG CAATGCAAAA
AGATTTTTTA TACATGTTAT CAATCCTAAA TTAGGGGTAA TGTATGAAAA ATTAAAAAAA
CTTTCTGAGG ATAAAGAAGG TGTGTTTTTT GATTATTTCA ACACGGATTT TAAACAAATT
TCCATGTGGT TGCAAAATAA TGATATAGGA TTAGTTGTAA CTGATATAAA AAATTTTGAG
AAAGAAAAAC AAGTTTTTTT TGATTTAAAA ATTCCTATTA TGAAGGTGGG CGAAGCTTCT
TTTGATGAGC TTAAAGAAGC GATTATTTTA AGTGCTGATG AGAGTGAACT TGAAAACAAT
GCAAATGTCA TTACTGATTT AAGTAAACAG CTTGATTTTG GAGTTATTTT ATATTATTAT
AATCCAAATT CTCAAAATAC TACAGATATG GAGGAGTATT TTAGAAGTTT ATCTAAGCTT
TATGATAAAA ATATACAAAT TATTAATAAA AATGATGAAA ACCCTCTTTT AAATTTGCAA
TATCGCGAAG ATTTATTACA ATTTGTGAGT TTTCAAAAAG AATTACTAAA TAGAGATTTT
GCCAGAAATT TAAGTACAAA TTTAAATAGG CATTATTACA AAATGAGACA AAATTACCAA
CTTTTCATAC CAGTAGAATA A
|
|---|
| Protein sequence | MNNILIIIDG ILAKHFLERL CFEKGLGYFF TVVCQNSEKN NLNISSEYID LHYFDPTSTA
RLENIISKDF KQAFIYMQDE FETKKSYEAL RSLNPNLEIE IMDFWGLSVN DTHANLADAR
MTLSRRFMDF LPDIALTAQY IGLGVGEIME VKIPAGSIFA YRHISSIQQK RWRIVLIYRN
SKIYFVKPSF VLEPNDSILI VGDPVVLQSI FHNIRGKAGQ FPMPFGSNVF ALIDMKNMNQ
NMQERVLDTT LKLTQKSNAK RFFIHVINPK LGVMYEKLKK LSEDKEGVFF DYFNTDFKQI
SMWLQNNDIG LVVTDIKNFE KEKQVFFDLK IPIMKVGEAS FDELKEAIIL SADESELENN
ANVITDLSKQ LDFGVILYYY NPNSQNTTDM EEYFRSLSKL YDKNIQIINK NDENPLLNLQ
YREDLLQFVS FQKELLNRDF ARNLSTNLNR HYYKMRQNYQ LFIPVE
|
|---|
| |