| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1038 |
|---|
| Symbol | |
|---|
| ID | 3231548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | - |
|---|
| Start bp | 977312 |
|---|
| End bp | 978904 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637292399 |
|---|
| Product | putative inner membrane protein translocase component YidC |
|---|
| Protein accession | YP_179034 |
|---|
| Protein GI | 57237786 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0706] Preprotein translocase subunit YidC |
|---|
| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.493548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATAATT CAAATAATAT TTTTCAGCAA AAGCGTATAC TTTTAGCTGT TGTGATTTCT
TTTTTATTTT TTGTTGTTTA CGATTATTTT TTCATTCCAA AACAACCTTT AAAAATAGAA
CAAAACATTA CACAACAAAA TCAACAAAAC ACAAGCATAA ATAACACTCC TAATATACAA
AATACCACCA CAAATACTCC AAGTGCAGCT TTAGTTTCAC AAGATAGTGT GATATCTAAG
GTTCAAAGCA AGCATTTTGA AGCACAAATT GACTCTTTTG GTAGAATTTC TGCTTTTTAT
TTAAAAGATA AAAAATACCA AAATGAGAAA GGAGAATTTA TAAATCTTGT TAGCAAGGAA
AATAGTCCTT ATCCTTTAGA AATGCGTTTT AGTGATCCAA GTATTAACTC AGAGGCTTTT
AAAATTCCTT ATGTTGCTAA CGCTAGCAAT CTTTTTGTTG ATGAAAATGG AAGTCAAGTT
TTAAAACTCA CTCAAAATCT TTCTGGATTG AAAATCGAAA AAGATATTAC TTTTTATCCA
AAAGGAAATT ATGAGATAGA AGTTAAACTC AGCAAGAATG CAAATTATTT TATAAGTCCA
GGATATCGTC CAAATATTGC CGTAGATAGT TATACAGTTC ATGGTGCTTT GGTAATGGAT
AATAAAGAAA CCATCGAAAC TTATAAAGAT GGAGATGTAG AAAAGGATGA AAGTGCTAAT
AATGTCGTAA TGACTTCGGC TTTTGATAGA TACTATGCAA CTTTCTTTTA TAATTTTGAT
AAACCTTTAA ATGTGGCAAT CAGCAAGGAT GCTAATCAAA ACCCTATAGT TTTTGCTTAT
AGTGATAATG AATTTAAAGC AGGGGGCTAT ATAGGCTCTA AAGAACATGT GATTTTAAGA
AGTATAGATC CACGCCTTGA AGCAGTTGTT GAATATGGTT GGTTTACTTT TATTGCTAAG
CCTATGTTTG AGTTTTTGAA TTTCTTGCAT CAGTATATAG GAAATTGGGG TTGGGCTATC
GTTGTGATGA CTTTAATTGT GCGTATTATT TTATTCCCGC TAACTTATAA GTCTATGATT
TCTATGAATA AACTTAAAGA TCTTGCTCCT AAAATGAAAG ATATTAGAGA GCGTTATAAA
GGCGATCCAC AAAAAATGAA TATGCACATG ATGGAGCTTT ATAAAAAACA TGGTGCAAAT
CCTATGAGTG GTTGTTTGCC TATACTTTTA CAAATTCCTA TTTTCTTTGC TATTTATCGC
GTTTTGCTTA ATGCTATTGA GCTAAAAGCA GCTCCTTGGG CGTTTTGGAT ACATGATTTA
TCGGTAATGG ATCCTTATTT CATTTTGCCT ATTTTAATGG GTGCAACGAT GTTTTTACAA
CAACTTATTA CGCCTATGAC TATACAAGAT CCTATGCAAG CTAAGATTAT GAAATTTTTA
CCAGTGATTT TTACTTTTTT CTTTATCACT TTCCCAGCAG GACTTACGCT TTATTGGTTT
GTAAATAACC TTTGTTCTTT GGTTCAACAA TGGGTTATCA ATAAAATATT TGCTAAAGAA
CATCACAAAA AACAAGCGGA GCATGAAAAA TGA
|
|---|
| Protein sequence | MNNSNNIFQQ KRILLAVVIS FLFFVVYDYF FIPKQPLKIE QNITQQNQQN TSINNTPNIQ
NTTTNTPSAA LVSQDSVISK VQSKHFEAQI DSFGRISAFY LKDKKYQNEK GEFINLVSKE
NSPYPLEMRF SDPSINSEAF KIPYVANASN LFVDENGSQV LKLTQNLSGL KIEKDITFYP
KGNYEIEVKL SKNANYFISP GYRPNIAVDS YTVHGALVMD NKETIETYKD GDVEKDESAN
NVVMTSAFDR YYATFFYNFD KPLNVAISKD ANQNPIVFAY SDNEFKAGGY IGSKEHVILR
SIDPRLEAVV EYGWFTFIAK PMFEFLNFLH QYIGNWGWAI VVMTLIVRII LFPLTYKSMI
SMNKLKDLAP KMKDIRERYK GDPQKMNMHM MELYKKHGAN PMSGCLPILL QIPIFFAIYR
VLLNAIELKA APWAFWIHDL SVMDPYFILP ILMGATMFLQ QLITPMTIQD PMQAKIMKFL
PVIFTFFFIT FPAGLTLYWF VNNLCSLVQQ WVINKIFAKE HHKKQAEHEK
|
|---|
| |