Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE1036 |
Symbol | trmE |
ID | 3231546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | - |
Start bp | 975176 |
End bp | 976504 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637292397 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_179032 |
Protein GI | 57237784 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.788526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATA CTATAGCGGC TATTGCCACA GCTCATGGTG TGGGTTCGAT TTCTATTGTA AGATTAAGCG GTGAAAGGGC TTTAGAATTT GCCTTAAAGC TTAGCCACAA AACCAAACTT ACCCCACGCC ATGCTACTTT TACAAAACTT TTTAATCAAA ATAATGAAAT TATCGATGAA GCTATAATGA TATATTTTAA AGCCCCTTAT AGTTTTACAG GGGAAGATAT AGTAGAGTTT CAAATTCATG GAGGATTTAG TGTGAGTGAA GTTTTACTCG AAGAACTTGT GAGTTTAGGA GCAAGACTTG CTTTAGCAGG GGAATTTAGC AAAAGAGCGT GTTTAAATGG TAAAATGACT CCTTTAAAAG CTTTAAATAT ACAAGATCTC ATACTTTCAA AATCTGCACT TGCAGCTAAA ATTATAGCAC GCAACATGCA AGGAAACTTA GGAGAACTTT TAGAAAAAAT TCGCACAGAT TTGGTTAAAA CTTTAGCTTT TGTAGAAACT AGTATTGATT ATGCTGATGA TGATTTACCT TCTGATTTAT TAGAACAAAT TTCTACTATG TGTGAAGAAA ATTCTAAAAT TTTAAAAGAA ATTTATACGC TTTCTCAAAG CAAAAAAGGA CTCATAGAAG GTTTTAAAAT CGCTATTGTA GGTAAGCCAA ATGTAGGCAA ATCTTCGCTT TTAAATGCCT TGCTTTCTTA TGAAAGAGCT ATTGTTTCAG ATATAGCAGG CACCACTCGT GATACTATAG AAGAGAGCTT TAAATTAGGA ACGCATTTAT TACGCATTAT AGATACAGCG GGTATTAGGG AAAGTAAAGA TGTTATAGAA CAAATCGGCG TAGCTTTAAG TAAAAAAAGT TTAGAAGATG CAGATATTAT TTTGGCAGTC TTTGATGCTT CAAGAGTGCA AGATAAAGAA GATGAGAAAA TTTTTGACTT ATTAGCAAAT ACTGATAAAA AAATCTTTTG GATTTTAAAT AAAAGTGATT TAGAAAATGT TTTCAAAAAT ACTCAAAATA AAAATTTTAT CAAGCTTAGT GCTCAAAAAG ACATCACTTT GTTAAAAGAA GAATTGCAAA ATTATCTTAA TTCTTTTGAT AGTGAAGGTA TTATGGTAAG TTCTTTAGAT CTTATTAATG CTTGTAAAAT TTCAAGTGAA GCGATTTTTA GAGCTAAGGG ACTTTTAGAG GAAAGTTCTT TAGAACTTTT TGCTTTTGAA CTTAATTTAG CGATTAATGA ACTTGCAAGA TTTACCAAAG ATTTTCAAAG AGATGAAATT TTAGACGAAA TGTTTGGTAA TTTTTGTTTA GGAAAATGA
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Protein sequence | MSDTIAAIAT AHGVGSISIV RLSGERALEF ALKLSHKTKL TPRHATFTKL FNQNNEIIDE AIMIYFKAPY SFTGEDIVEF QIHGGFSVSE VLLEELVSLG ARLALAGEFS KRACLNGKMT PLKALNIQDL ILSKSALAAK IIARNMQGNL GELLEKIRTD LVKTLAFVET SIDYADDDLP SDLLEQISTM CEENSKILKE IYTLSQSKKG LIEGFKIAIV GKPNVGKSSL LNALLSYERA IVSDIAGTTR DTIEESFKLG THLLRIIDTA GIRESKDVIE QIGVALSKKS LEDADIILAV FDASRVQDKE DEKIFDLLAN TDKKIFWILN KSDLENVFKN TQNKNFIKLS AQKDITLLKE ELQNYLNSFD SEGIMVSSLD LINACKISSE AIFRAKGLLE ESSLELFAFE LNLAINELAR FTKDFQRDEI LDEMFGNFCL GK
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