Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0904 |
Symbol | kdsB |
ID | 3231417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 842944 |
End bp | 843663 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637292261 |
Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
Protein accession | YP_178906 |
Protein GI | 57237658 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.282044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATTA TCCCTGCAAG ATTAAAATCA AGTCGTTTTC ATGAGAAAAT TTTATGTGAT GTAGGTGGAG TGCCTATGTT TGTGGCTACT GCAAGAAGGG TAAGTAGTGT GGATGAAGTT TGTATAGCTT TAGATGATGA AAAGGTTTTA AGTATCGCTA AAGAATATGG TTTAAATGCA GTTTTAACAA GCAAAAATCA TGAAAGCGGT ACGGATAGGA TTAATGAAGC TTGTAAGAAA CTATCTTTAA AAGATGATGA GATTATTATC AATGTCCAAG CTGATGAGCC TTTTATAGAA TGTGAAAATT TATTAAAATT TAAAGAATTT GCAAGTTCTT GCTTGGATAA AAAAGCTTTT ATGGCGAGTT GTTATAAAAA AATCACTCAA GAAGAAGCTA TGGATTCTAA TTTGGTTAAA GTGCTTTGCG ATAAAGAAGG ATATGCTTTG TATTTTTCAA GAGCTAAAAT CCCTTATGAA AGAGAAAATT ACGAGGAAAG TTTTAAAGGG CATTTAGGCA TTTATGCTTA TAGTGTAAAA GCTTTAAGAG AGTTTTGTTC TTTATTAAGT TCTGCACTTG AAAGAGCGGA AAAATTAGAG CAATTAAGAG CTATAGAAAA TGGTAAAAAA ATCAAAATGC TTGAAATTTC AACAACAAGC ATGGGGATTG ATACCAAAGA AGACTATGAA AAGGCTTTAA AAATTTATTT AGAAAAATAA
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Protein sequence | MIIIPARLKS SRFHEKILCD VGGVPMFVAT ARRVSSVDEV CIALDDEKVL SIAKEYGLNA VLTSKNHESG TDRINEACKK LSLKDDEIII NVQADEPFIE CENLLKFKEF ASSCLDKKAF MASCYKKITQ EEAMDSNLVK VLCDKEGYAL YFSRAKIPYE RENYEESFKG HLGIYAYSVK ALREFCSLLS SALERAEKLE QLRAIENGKK IKMLEISTTS MGIDTKEDYE KALKIYLEK
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