Gene CJE0855 details

Gene Information

• Locus tag: CJE0855
• Symbol: speA
• ID: 3231368
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: -
• Start bp: 793233
• End bp: 795068
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637292212
• Product: arginine decarboxylase
• Protein accession: YP_178857
• Protein GI: 57237609
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGATT ATGGTATTGA TATTTGGGGA AATGAAAATT TCATTATCAA AAATGGTAAA 
GTTTGTATCA ATTACGAGAA AAAACCTGCT ATTATTGATA TAGTTAAAGA ATTAAGAGAT 
GATGGATACA AGGGGCCTTT ACTTTTAAGA TTTCCTCATC TTATCCAAAA ACAAATTGAA 
AATATTTACG GAAATTTCAA TAAAGCAAGA AAGGAATTTG GCTATAAAGG AGGATTTAAC 
GCTGTTTATC CTTTAAAGGT CAATCAATAC CCTGGTTTTG TAAAAAATCT TGTAAAACTT 
GGAAAAGACT ATAACTATGG ACTTGAAGCA GGTTCTAAGG CAGAGCTTTT ACTCGCTATG 
GCTTATAATA ACGAAGGCGC ACCTATTACC GTAAATGGCT TTAAAGATAG AGAACTTATC 
AACATAGGCT TTATTGCAGC TGAAATGGGA CATAATATCA CTTTAACCAT AGAAGGACTT 
AATGAACTTG AAGCTATCAT AGACATAGCT AAAGAACGCT TTAAACCTAA ACCAAATATA 
GGCTTACGTG TACGTTTGCA TTCTGCTGGA GTTGGAATTT GGGCAAAAAG CGGTGGGATT 
AATTCTAAAT TTGGACTTAC ATCCACTGAA CTCATAGAAG CGGTAAATTT ACTCAAAGAA 
AACAAACTTT TAGAACAATT TACCATGATT CACTTTCATC TAGGCTCACA AATTACCGAA 
ATTCACCCCT TGAAAAAAGC CTTAAATGAA GCAGGAAATA TCTATACAGA ACTTAGAAAA 
ATGGGAGCTA AAAATCTAAA AGCTATTAAT CTTGGTGGCG GTTTAGCTGT GGAATACTCA 
CAATTTAAAA ATGAAAAAAG TAGAAATTAC ACCCTAAGAG AATACGCTAA CGATGTAGTT 
TTTATCCTAA AAAACATAGC CGAACAAAAA AAAGATTTAG AGCCTGATAT TTTCATAGAA 
AGTGGACGTT TTGTAGCAGC TAATCACGCT GTTTTAATCG CTCCTGTATT AGAACTTTTT 
TCTCAAGAAT ACACAGAAAA CAAACTCATA CTTAAAAAAC AAAATCCAAA ACTTATCGAT 
GAGCTTTATG ATCTTTATAA AAGTATAAAA CCTTCCAATG CTTTAGAATA CTTGCACGAT 
AGCATAGATC ATTTAGAGAG TATTTTAACT CTTTTTGATT TGGGCTATGT GGATTTACAA 
GATCGTTCCA ATGCTGAAAT TTTAACTCAT TTGATTACAA AAAAAGCCAT CTTGCTTTTA 
GGCGATAAGC AAAATCCTGC GGATTTACTT GCCATACAAG ATGAAGTGCA AGAAAGGTAT 
TTGGTAAATT TTTCGCTCTT TCAAAGCATG CCTGATTTTT GGGGTTTAGA ACAGAATTTC 
CCCATCATGC CACTTGATCG CTTAGATGAA GAACCGACAC GAAGTGCAAG TATTTGGGAT 
ATAACCTGCG ATAGCGATGG AGAAATTTCA TACTCTAAAG ATAAACCTTT ATTTTTGCAC 
GATGTAGATG TAGAAAAAGA AAATTATTTT CTAGGGTTTT TTCTTGTAGG TGCCTATCAA 
GAAGTACTTG GAATGAAACA CAATCTTTTT ACTCATCCTA CTGAAGCTAT TATAAGCATC 
AATGAAAAAG GCTATGAAGT CGAGGGGATT ATAGAAGCGC AATCCATACT TGATACCTTA 
GAAGATTTAG ACTATGATAT ACACGCTATC ATGGATATAC TTAATGAACG CATAAGTAAT 
TCTAAGCTTG TAAATGATAA GCAAAAAAAG CATATTTTAG GCGAACTTTA TCTTTTCTTA 
AATGATAATG GTTATTTAAA AAGCATAGGA GTTTAG 

 

Protein sequence

MMDYGIDIWG NENFIIKNGK VCINYEKKPA IIDIVKELRD DGYKGPLLLR FPHLIQKQIE 
NIYGNFNKAR KEFGYKGGFN AVYPLKVNQY PGFVKNLVKL GKDYNYGLEA GSKAELLLAM 
AYNNEGAPIT VNGFKDRELI NIGFIAAEMG HNITLTIEGL NELEAIIDIA KERFKPKPNI 
GLRVRLHSAG VGIWAKSGGI NSKFGLTSTE LIEAVNLLKE NKLLEQFTMI HFHLGSQITE 
IHPLKKALNE AGNIYTELRK MGAKNLKAIN LGGGLAVEYS QFKNEKSRNY TLREYANDVV 
FILKNIAEQK KDLEPDIFIE SGRFVAANHA VLIAPVLELF SQEYTENKLI LKKQNPKLID 
ELYDLYKSIK PSNALEYLHD SIDHLESILT LFDLGYVDLQ DRSNAEILTH LITKKAILLL 
GDKQNPADLL AIQDEVQERY LVNFSLFQSM PDFWGLEQNF PIMPLDRLDE EPTRSASIWD 
ITCDSDGEIS YSKDKPLFLH DVDVEKENYF LGFFLVGAYQ EVLGMKHNLF THPTEAIISI 
NEKGYEVEGI IEAQSILDTL EDLDYDIHAI MDILNERISN SKLVNDKQKK HILGELYLFL 
NDNGYLKSIG V