Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0818 |
Symbol | dnaE |
ID | 3230768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 750686 |
End bp | 754288 |
Gene Length | 3603 bp |
Protein Length | 1200 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637292173 |
Product | DNA polymerase III subunit alpha |
Protein accession | YP_178822 |
Protein GI | 57237020 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAAT TTACACACTT GCATTTACAT ACAGAATATT CTTTGCTTGA TGGAGCCAAT AAGCTTAAAG AATTAGCTTT GACTTTAAAA GAGCAGGGTG CTACAAGTGT TGCTATGACA GATCATGGAA ATATGTTTGG GGCAATTGAT TTTTATCAAA CAATGAAAGC ACAAGGTTTA AAACCTATCA TTGGTATGGA AGCGTATTTA CATAATCACG ATGAATTAGA TGATAAAAGT TCTCGTCAGC GTTTTCACCT TTGTTTGTAT GCAAAAAATG AGATCGGATA TCAAAATTTA ATGTATTTAA GTTCTCAAAG TTATATTAAA GGTTTGTATT ATTATCCGCG TATCAATAAA AAGCTTTTGG AAGATTATAG CGAAGGTCTT ATTTGCTCTT CTGCTTGCTT GCAAGGTGAA GTAAATTGGC ACTTAAATAC TTATAGTGAA AGAAATGTGC GTTTTGGTGC AAAAGGCTAT GAAGCAGCAA AAGAAGCGGC ATTATGGTAT AAAAAAGTTT TTAAAGATGA TTTTTATTTT GAAATCATGC GTCATGGTAT AGGCGATCAA AGAATGATAG ATGATGATAT TATCAGACTT TCTAAAGAAT TAAATATAAA AATCATTGCT ACAAATGATA CGCATTACAC TTTTAAAGAA AGAGCGGCTG CCCATGAGGT TTTTATGTGT ATAGCCATGG GAAAAAAACT TAACGATCCT GATAGAATGC GTCATAGTGT GCATGAATTT TATGTTAAAA GTCCTGAGCA GATGAGTGAG CTTTTTGCAG ATATTCCAGA AGCTATAGAA AATACACAAG AAATCGCACA AAAATGTAAT TTAGAGCTTA ATCTTGGCAA TCCCACTCCA CCGAATTTTA AATTTACAAG AGAATATGCT AAAGATCATA ATATTATCTT ACCTGAAGAA ACAAAAGAAT TTAGCTTTGA TAATGATGAC ATGGTTTTTG AAGAACTTTG TAAAAAAGGA CTTAAAGAGA GATTAAAATT TATCGATGAA AGTAAGCATG AAGAATACAA ACAAAGACTT GAAGTAGAAA TTAACATCAT TAAAAATATG AAATTTTCAG GTTATATGCT TATTGTTCAT GATTTTATTA AAGTGGCTAA GGATAAAGGT ATTCCAGTAG GCCCTGGAAG AGGATCAGCT GCAGGAAGTT TGGTTTCTTA TTGTTTAAGG ATTACGGATT TAGATCCTAT TCCTTATAGT CTACTTTTTG AGCGTTTTTT AAATCCTGAG CGTGTGAGCA TGCCTGATAT TGATGTGGAT TTTTGTCAAG ACAGACGTGC TGAAGTGATT GATTATGTGA TTGATAAATA TGGAGCGGAT AAGGTTGCAC AGGTGATTAC CTTTGGTAAA CTTTTGGCTA AAGGGGTGAT TCGTGATGTG GCTAGAGTTT GTGATATGAG TATTCAAGAT GCTGATGAAC TTGCTAAACT TGTGCCTGAA GAGCTTAAAA TCACTCTTGA TGCTGCTTAT GAAAAAGAAC CTAAAATCAA AGAATTTATC GATCGTCATC CTAAAGGTCC TGAAGTTTGG GAGTATGCAA GAGCTTTGGA AGGATTAAAT CGCAATGCTG GTATGCACGC AGCGGGTGTT GTAATTTCTA ATGAAAGTTT ATGGAAGAAA ACTCCGCTTT TTAGACAAAG TAAAAATGAT GAAAGACATT TAGTAACGCA GTACTCTAAA GATCATTTAG AAGATGTGGA TTTGATAAAA TTTGACTTTT TAGGTCTTAA AACTTTAACA GTAATTAATA ATGCAATCAA GCTTATTAAA AAGCGTTACA ATAAAGACAT TATTTGGGAA ACTATAGATG TAAATGATAG CAAGGTTTAT AAAACCATAC AAAGTGGAAA TACTTTAGGG ATTTTTCAAA TCGAATCAGG CGGTATGCAA AGCTTAAATG CACGCTTAAA ACCAGAGCGT TTTGAAGATA TCATTGCGGT TCTTGCGCTT TATCGTCCAG GCCCTATGGA ATCAGGAATG CTTGATGATT TTATCGATAG AAAGCACGGT TTAAAAAACA TAGAATATCC TTTTGACAGT TTAGAAAAGG TTTTAGAACC TACTTATGGG GTTATTGTTT ATCAAGAACA GGTTATGCAA ATTGTTCAAA TTATAGGTGG CTTTTCTTTA GGAGGTGCTG ATGTAGTGCG TCGTGCTATG GGTAAAAAAG ATCCTGAGAA GATGAAGAAG CTTAAGACTG ATTTTGCAGA TGGAGCAGAA AAACAAGGAT ATGATAGAGT AAAAGCTGAA GATTTATGGG AGCTTATCGT AAAATTTGCA GGATATGGTT TTAATAAATC TCACTCTGCG GCTTATGCGT TGATTACTTT TCAAACAGCT TATTTAAAAA CTTATTACCC TAGTGAATTT ATGGCAGCGC TTTTAACAAG CGAAGAAAAC AATGTGGATA AAATTGCTGT TTATATTGAT GAGATGAAAA AAATGAATAT TAAACTTTTA CCTCCATCGA TTAACAAAGC GATCCGTGAA TTTAGTGCTT TAGAGCAAGA TGGCAAGGAT GCTATTATAT ACGGACTTGG GGCTATAAAA AGTGTGGGTA TTCCTGCAGT TGAAAATTTA CTTGAAGCAA GGCAAGATGG AGAATTTAAG GATATTAATG ATTTCTTAGG TAAGATAGAT CCTACCAAGA TAAACCGTAG AACATTAGAA AGTCTTATTA AGGCAGGGGC TTTTGATGAG TTTGGTTTTA CTAGAAAAGC TTTGTTTGAT AATATGGAAA ATCTTAGCGA AGCATCGCGT AAAATGGCTG AAGTAAGAAA AAATGCTGCA AGTTCTCTTT TTGGTGAAGA GGAGTTAACT TCAGGTGTTC AAGTAAATTT TACTCCCAAA AATGAAGAAT TTGAAGTGAT GGAAAAATTG GGATATGAAA AAGAAATTTT AGGAATTTAT GTTTCAGGCC ATCCTTTAGA TCGATTTTAT GAACAAATTA ATGCCATAGA TTATGTTAAA AGTTTAGAGT TTGAAGGTTT AAAAAACAAT GGAGAAATTT TAAGTATAGG TAAAATTGAA GATTTTAAAT CTATGATGAG TAAAAATAAT AAGCGTTATG GTAGAATTGA AATTTTGGAT TATTATTCTT CGTTTGATGC TACTGTATTT GAAAGTAATG TAGAAGAAAT AGAAAATATC ATTAAAGATG AAAATTTGAA AAATAATGCT TATGGTTTTG TATTGGGATT TAAAGCTGAA GGAGGGGAAA AGCCCAGCTT TTTTTTAAAA GCAATTAAAG ACTTGCAAAG TCTTGAAGAT GGTGAGATTA AAGCTATAAA AAAATTTGGC ACAAAAAAAG ATTTTAAAAA TAAAGAAGAA AATCATTTTA CCGCAGAACC TAAGGAATTT GAAAAAAATA TCATAGAGCT AGATTTGACA AGGTTAAATA GAGAATTAAT CTATGAAATT CATGAAATTG CTAGAAATGC ACATAATCCT AATGAAAAAA ATAATAAAAA ACTTGTTTTA AAAGTTATTA GCGCGGGATC TTGCCTGCTT TATCATACAG ATTTTATTAT CTCTGATAGT ATAGTAGAGG AAATTTCTAA TAAATATGCT TAA
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Protein sequence | MSQFTHLHLH TEYSLLDGAN KLKELALTLK EQGATSVAMT DHGNMFGAID FYQTMKAQGL KPIIGMEAYL HNHDELDDKS SRQRFHLCLY AKNEIGYQNL MYLSSQSYIK GLYYYPRINK KLLEDYSEGL ICSSACLQGE VNWHLNTYSE RNVRFGAKGY EAAKEAALWY KKVFKDDFYF EIMRHGIGDQ RMIDDDIIRL SKELNIKIIA TNDTHYTFKE RAAAHEVFMC IAMGKKLNDP DRMRHSVHEF YVKSPEQMSE LFADIPEAIE NTQEIAQKCN LELNLGNPTP PNFKFTREYA KDHNIILPEE TKEFSFDNDD MVFEELCKKG LKERLKFIDE SKHEEYKQRL EVEINIIKNM KFSGYMLIVH DFIKVAKDKG IPVGPGRGSA AGSLVSYCLR ITDLDPIPYS LLFERFLNPE RVSMPDIDVD FCQDRRAEVI DYVIDKYGAD KVAQVITFGK LLAKGVIRDV ARVCDMSIQD ADELAKLVPE ELKITLDAAY EKEPKIKEFI DRHPKGPEVW EYARALEGLN RNAGMHAAGV VISNESLWKK TPLFRQSKND ERHLVTQYSK DHLEDVDLIK FDFLGLKTLT VINNAIKLIK KRYNKDIIWE TIDVNDSKVY KTIQSGNTLG IFQIESGGMQ SLNARLKPER FEDIIAVLAL YRPGPMESGM LDDFIDRKHG LKNIEYPFDS LEKVLEPTYG VIVYQEQVMQ IVQIIGGFSL GGADVVRRAM GKKDPEKMKK LKTDFADGAE KQGYDRVKAE DLWELIVKFA GYGFNKSHSA AYALITFQTA YLKTYYPSEF MAALLTSEEN NVDKIAVYID EMKKMNIKLL PPSINKAIRE FSALEQDGKD AIIYGLGAIK SVGIPAVENL LEARQDGEFK DINDFLGKID PTKINRRTLE SLIKAGAFDE FGFTRKALFD NMENLSEASR KMAEVRKNAA SSLFGEEELT SGVQVNFTPK NEEFEVMEKL GYEKEILGIY VSGHPLDRFY EQINAIDYVK SLEFEGLKNN GEILSIGKIE DFKSMMSKNN KRYGRIEILD YYSSFDATVF ESNVEEIENI IKDENLKNNA YGFVLGFKAE GGEKPSFFLK AIKDLQSLED GEIKAIKKFG TKKDFKNKEE NHFTAEPKEF EKNIIELDLT RLNRELIYEI HEIARNAHNP NEKNNKKLVL KVISAGSCLL YHTDFIISDS IVEEISNKYA
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