Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0812 |
Symbol | rimM |
ID | 3230762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 746394 |
End bp | 746933 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 637292167 |
Product | 16S rRNA processing protein RimM |
Protein accession | YP_178816 |
Protein GI | 57237014 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.335804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGTGAAA AAGATTTTGT TCAAGTTGCA AAACTTGGTA AAACTGTGGG TCTTAAGGGT TATGTAAAAT TGCATAACCT GAGCGACTTT TCTTCTCAAT TTAAAAAAGA TGCTACTTTT TTTATAAAAA ACACCAAAGA AATGTTAAAG ATTAAGCATT ATAATGCAAA CAATTCTACT GTTTTATTTG AAAATTATGA AGATATAGAA AAGGCCAAAG AATTAACTAA TCTTATTCTT TTTCAGAGTA TCGAGAAAAG CAGACAAACT TGTAAATTAA AAAAAGATGA GTTTTTTTAT TTTGATATTT TAGAGTGTGA AGTTTTTGAA GAAGATAAAA GATTAGGTAA AGTGGTTGAT ATCTTGGAAA CTGGAGCTTC TTATTTATTT GAAATTCAAA GTGATGAAAA ATGGGTTGAA AAAAAATATC CTAAAATATT TTTTATTCCA TATTTGGGTA AATTTGTTAA AAATATAGAT ATAGAAAAAC GACAGATTTT TTGCACGCAA GATGCTTTTT TAATTTTAGA AAATTCATGA
|
Protein sequence | MSEKDFVQVA KLGKTVGLKG YVKLHNLSDF SSQFKKDATF FIKNTKEMLK IKHYNANNST VLFENYEDIE KAKELTNLIL FQSIEKSRQT CKLKKDEFFY FDILECEVFE EDKRLGKVVD ILETGASYLF EIQSDEKWVE KKYPKIFFIP YLGKFVKNID IEKRQIFCTQ DAFLILENS
|
| |