Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0722 |
Symbol | |
ID | 3231956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 654687 |
End bp | 656003 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637292084 |
Product | MATE efflux family protein |
Protein accession | YP_178733 |
Protein GI | 57238186 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0500546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAAAA AACAACTCTC CTTAACAAGA CTTAGTTTTC CTATATTTTG GGATTTGCTT TCTAAGTATT TAACTGTGAT TATCAATACC GCTATGGTGT CGCATTATTC TAATTTTCTT GTTGGTGCTA TGGGCGCTGG AAATCAAATT TTAGATCTTT TTATCACTAT TTTTTCATTT TTAAGTGTGG GTTGTAGTGT GCTGATCGCA CAAGCAATTG GTGCAAAAGA TCATGTTTTA GCAAGAAAAG TGATTCATCA AAGTTTGTTC TTAAATGCAC TTTTAGGCTT TGTATGCGGT GTGCTTATTT TATGGCATGG GGAGTATTTG CTTTATCTTT TAAAAATTCC ACAAGAATTG CTCAAAGATA GCGAAATTTA CTTACATATG CTTGCAATTT GTTTGTTTTT TGATGCCATA GGTATTGTTT TAGCTGCTAT TGTAAGGGTT TATAATATGG CTTATTGGGT CATGTTTATA GGTTTTTTGA TGGATATAGT GGTGATTTGC GGAAATTATT ATGTTTTGCA TTATACAAAG TCAGAACTTT TTGGAATAGG GCTTAGTAAT ATTTTTGCTC GCATTGTTGC TATAGTTGCT TTGTTTGCGA TACTTTTTTA TAAACTTAAA ATTCATCTTA AAATCAAAGA AATGATAAAA CTTGAAAAAG AAGTTTTAAA AAAGGTTTTA AATATAGGTG GATTTTCAGC AGGGGAAAAT CTTTTGTGGA TAGTCCAATA CACTATAGCT TTTGCTTTTG TAGCAAGTTT AGGTGAGGCG AGTTTGAGTG TGCAAACGAT TTATTTTCAA ATTTCAATGC TTATCATGCT TATAGGACAA GCTACGAGCA TAGCTAATGA AATTATAGTA GGTAAATTAA TCGGTGCTAG ATATGAAAAT ATAGCTTATA AACACGCTTG GCGTGCTTTA TATTTTAGTG TAATAGCGAG TGCTTTAGTG GCACTTTTGA ACTATCTTTG TCAAGATTTT ACTATGCAAA TTTTAGGGCT TAAAGAAGAG TTAAAAAATT TAATGATACC TTTATTTGCT CTTTCAATCT TTCTTGAAAT TTCACGAACT TTTAATATAG TTATGGTAAA TTCCTTGCGC GCAAGTGGCG ATGCTAAGTT TCCATTTTTT AGCGGACTTG TTTTTATGAT GGGGGTATCT TTACCTGTGG GTTATGTGCT TTGTTTTCAT TTTAATCTTG GAATTTTAGG GGTTTGGATA GGATTTTGTG CAGATGAGTT TTTGCGTGGA ATGGTAAATT CATACAGATG GAAAAGCAAA AAATGGCAAG GCAAAGCTCT AGTTTAA
|
Protein sequence | MAKKQLSLTR LSFPIFWDLL SKYLTVIINT AMVSHYSNFL VGAMGAGNQI LDLFITIFSF LSVGCSVLIA QAIGAKDHVL ARKVIHQSLF LNALLGFVCG VLILWHGEYL LYLLKIPQEL LKDSEIYLHM LAICLFFDAI GIVLAAIVRV YNMAYWVMFI GFLMDIVVIC GNYYVLHYTK SELFGIGLSN IFARIVAIVA LFAILFYKLK IHLKIKEMIK LEKEVLKKVL NIGGFSAGEN LLWIVQYTIA FAFVASLGEA SLSVQTIYFQ ISMLIMLIGQ ATSIANEIIV GKLIGARYEN IAYKHAWRAL YFSVIASALV ALLNYLCQDF TMQILGLKEE LKNLMIPLFA LSIFLEISRT FNIVMVNSLR ASGDAKFPFF SGLVFMMGVS LPVGYVLCFH FNLGILGVWI GFCADEFLRG MVNSYRWKSK KWQGKALV
|
| |