Gene CJE0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJE0615 
SymbolpbpA 
ID3232062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni RM1221 
KingdomBacteria 
Replicon accessionNC_003912 
Strand
Start bp551127 
End bp553058 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content33% 
IMG OID637291979 
Productpenicillin-binding protein 1A 
Protein accessionYP_178630 
Protein GI57238289 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT TAAAATATAT TTTTTCATTT TTTACTCTTT TGTTTATAGC TGGATTTATT 
TATGTGGCTT ATCTTTTCAC AAGTGCTGAT ACTGAGGGTT ATACTTTTAA AGAATACAAA
CCTCCTCTTA CAACACAAAT TTACGATAGA AATGGCAAGC TTGTGGCTAA TATTTTTGAA
CAACATCGTT TTTACGCTCC TTATGAAGAG CTTCCTCCAC GCCTTATAGA AGCTTTGGTT
GCTATAGAAG ATACAAGCTT TTTTGAACAT AATGGAGTTA ATATCGATGC CATTTTTAGA
GCTGCTGTAA AAATCATAAA AAGCGGTGGA AAAACCATGG AAGGAGCTTC CACTCTTACC
CAGCAATTTA TTAAAAACAC GGAATTAACC CCTGAAAGAA CTATTACGCG TAAAATTCGC
GAAGCTTTGC TTGCTTATAA AATGGAAACC ATTTTAACTA AAGAGCAAAT TTTAGAAAGG
TATTTAAATT TTATTTTTTT TGGACATGGG TATTATGGAG TAAAAACCGC AGCTTTGGGG
TATTTTCATA AAAATTTAAA TGAATTAAGC CTTAAAGAGA TTGCTATGTT AGTAGGTATG
CCAAAAGCAC CTAGCAGTTA TGATCCTACA AAGCATTTAG ATCTTTCCAT TTCAAGAGCA
AATAATGTTA TTTCAAGAAT GTATAATCTA GGTTGGATTT CAAAAGCAGA TTATGATACA
GCCATTAAAG AAATTCCGCA AGTTTATGAT GATACGCTTA CTCAAAATGC TGCTCCTTAT
GTCGTAGATG AAGTGATTAA ACAATTAAGC CCTAATATCA AAGACTTAAA AACAGGTGGA
TATAAAATCA TTTTAAATAT AGACTTAGAT GTTCAAAATA TGGCACAGAA TGCTTTAAAA
TTTGGTTATG ATGAGATAGT AAAACGCGAT AAAGATGCAA ATTTAAGCAC TTTAAACGGA
GCTATGGTCG TGGTAAATCA TCAAAGTGGT GATGTTTTAG CTTTGGTAGG TGGAGTTGAT
TATGAAAAAA GTAATTATAA CCGCGCTACT CAAAGTATGC GTCAACCTGG AAGCTCTTTT
AAACCTTTTG TGTATCAAGT GGCGATTAAT TTAGGATATT CGCCTATGAG TGAAATTGCT
GATATTTCTA GAATTTTTGA AGGTGGAGCG GGTAATAATG AGGATTGGAA ACCTAAAAAT
GAAGGGGGTA AATTTTTAGG TTTAATTACC TTAAAAGAAG CTTTAACAAG ATCAAGAAAT
TTAGCTACCA TTAATCTCGC ACTTGATATG GGGCTTGATG TTCTTTACTC TAAACTAATG
GAATTTGGAT TTAAAGATAT ACCGCCTAAT TTATCAATCG TATTGGGAAG TTTTGGTATT
TCTCCTTTGG AGTATTCGAA ATTTTATACC ATGTTTGGGA ACTATGGTAC GATTAAAGAT
CCTCAAATTA TCAGACAAGT TCAGGATAAA ACCGGTAAAA CCATCATGGA ATTTAACTCA
AATGAGCGTA AAGTCAGCGA TGAAGCGCAA AGTTTTCTGG TTTTAGATAT GATGAGAAAT
GTTGTTGAAA AAGGCACAGG GCGTAATGCA AGAGTAAAAG ATATAGAAAT AGCAGGAAAA
ACAGGAACAA CGAATAAAAG TGTTGATGCT TGGTTTTGTG GACTTACGCC TGAAATAGAA
GCAATCATTT GGTATGGAAA TGATAACAAC AAGCCTATGC GTTATACAGA AGGTGGGGCT
AGAACAGCTG CTCCTGTGTT TAGAGAATTT TTAACTCAAT ATATAGAAAA ATTCCCTGAT
ACAACTAGAA AATTTAGCAT TCCTAATGGA GTTTATCGTG GAAATTATAA AGGAGAAAGT
GCTTATTATA CCACCAAATC ACCATTACCA AAAGCAAATA TGAAATTTAA TGAAAGCGAG
ATTATATTTT GA
 
Protein sequence
MKILKYIFSF FTLLFIAGFI YVAYLFTSAD TEGYTFKEYK PPLTTQIYDR NGKLVANIFE 
QHRFYAPYEE LPPRLIEALV AIEDTSFFEH NGVNIDAIFR AAVKIIKSGG KTMEGASTLT
QQFIKNTELT PERTITRKIR EALLAYKMET ILTKEQILER YLNFIFFGHG YYGVKTAALG
YFHKNLNELS LKEIAMLVGM PKAPSSYDPT KHLDLSISRA NNVISRMYNL GWISKADYDT
AIKEIPQVYD DTLTQNAAPY VVDEVIKQLS PNIKDLKTGG YKIILNIDLD VQNMAQNALK
FGYDEIVKRD KDANLSTLNG AMVVVNHQSG DVLALVGGVD YEKSNYNRAT QSMRQPGSSF
KPFVYQVAIN LGYSPMSEIA DISRIFEGGA GNNEDWKPKN EGGKFLGLIT LKEALTRSRN
LATINLALDM GLDVLYSKLM EFGFKDIPPN LSIVLGSFGI SPLEYSKFYT MFGNYGTIKD
PQIIRQVQDK TGKTIMEFNS NERKVSDEAQ SFLVLDMMRN VVEKGTGRNA RVKDIEIAGK
TGTTNKSVDA WFCGLTPEIE AIIWYGNDNN KPMRYTEGGA RTAAPVFREF LTQYIEKFPD
TTRKFSIPNG VYRGNYKGES AYYTTKSPLP KANMKFNESE IIF