| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE0528 |
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| Symbol | rpoB |
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| ID | 3231289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni RM1221 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003912 |
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| Strand | + |
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| Start bp | 477149 |
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| End bp | 481285 |
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| Gene Length | 4137 bp |
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| Protein Length | 1378 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637291894 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_178546 |
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| Protein GI | 57237532 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGATA TGTTAGATAA TAAATTAGGA AATCGTTTAA GAGTAGACTT CTCAAACATT
TCAAAACAAA TAGAAATCCC AAATCTTCTA CAATTACAAA AAAAGAGTTT TGATTATTTT
TTAAATCTTG ATAATGGTGA AAGTGGTATA GAAAAAGTTT TTAAATCAAT TTTTCCTATT
CATGATCCGC AAAATAGATT GAGTCTTGAA TATGTTAGTA GTGAAATAGG CAAGCCAAAA
TATACCATTC GCGAATGCAT GGAAAGAGGT TTGACTTATT CTGTAAATTT AAAAATGAAA
ATCCGTCTTA CTCTGCATGA AAAAGATGAA AAAACAGGGG AAAAAGTTGG CGTAAAAGAT
ATTAAAGAAC AAGAAATTTA TATCCGCGAA ATTCCTTTAA TGACAGATCG TGTATCTTTT
ATCATTAATG GGGTTGAGAG GGTGGTTGTA AATCAATTAC ATAGAAGTCC TGGTGTTATT
TTTAAAGAAG AAGAAAGTTC AACGGTTGCA AATAAGCTTG TTTATACAGC ACAAATTATT
CCTGATCGTG GTTCGTGGCT TTATTTTGAA TACGATGCCA AAGATGTTTT GTATGTAAGA
ATCAATAAGC GTAGAAAAGT TCCTGTAACT ATGCTTTTTA GAGCTTTAGG GTATAAAAAA
CAAGATATTA TTAAGTTGTT TTATCCTATT CAGACTATAC ATGTGAAAAA AGATAAATTT
TTAACAGAAT TTAATCCAAA TGATTTTATG GATAGAATAG AATATGATAT TAAAGATGAA
AAAGGAAAAA TCGTTCATCA AGCTGGAAAA AGACTTACAA AGAAAAAAGC AGAACAGCTT
ATTAAAGACG GTTTAAAATG GATAGAATAT CCTGTAGAAA TTTTACTTAA TCGTTATTTA
GCAAATCCTA TTATTGATAA AGAAAGTGGA GAGGTTTTAT TTGATTCTTT AACTTTGTTA
GATGAGAGTA AGCTTGCTAA GATTAAAGAG CAAAAAAGTT TTGATATAGC AAATGACTTG
GCTAATGGCG TTGATGCAGC GATTATTAAC TCCTTTGCTC AAGATGGAGA AACTCTAAAA
CTTCTTAAAC AAAGTGAAAA TATCGATGAT GAAAATGATT TAGCTGCGAT TAGAATTTAC
AAAGTTATGC GCCCAGGTGA ACCTGTGGTA AAAGATGCAG CGAAGGCTTT TGTAAATGAT
TTATTCTTCA ATCCTGAAAG ATACGATCTT ACTAAGGTAG GTCGTATGAA AATGAACCAT
AAGTTAGGTC TTGAAGTGCC TGAGTATGTT ACTGTTTTGA CTAATGAAGA TATTATTAAA
ACTGCAAAAT ATTTAATTAA AGTAAAAAAT GGTAAAGGAC ATATTGATGA TAGAGATCAT
TTAGGAAATC GTCGTATCCG TTCTATAGGT GAACTTTTAG CTAATGAACT TCATTTAGGT
CTTGCAAAAA TGCAAAAGGC GATCAGAGAT AAATTTACTT CTTTAAATGC GGATCTTGAT
AAAGTAATGC CTTATGATTT AATCAATCCT AAAATGATTA CTACAACTAT CATTGAATTT
TTTACAGGAG GTCAGCTTTC GCAATTTATG GATCAAACCA ACCCTTTAAG CGAGGTTACT
CATAAGCGTC GTTTGTCAGC GCTTGGTGAA GGTGGACTTG TAAAAGAAAG AGCAGGTTTT
GAAGTGCGTG ATGTTCACGC GACACATTAT GGTAGAATTT GTCCAGTTGA AACACCTGAA
GGTCAAAATA TTGGTTTGAT TAACACTCTT TCTACTTATG CAAAAGTAAA TGAACTTGGC
TTTGTTGAAG CGCCATATAG AAAAGTTGTA AATGGTAAAG TGACTAATGA AGTTGTTTAT
CTTACAGCGA CACAAGAAGA AGGCTTGTTT ATCGCACCAG CTTCAACTAA GGTTGATGCT
AAAGGCAATA TAGTAGAAGA ATTTGTTGAG GCTAGGCAAG ATGGTGAAAC TATACTTGCA
AGACGCGAAG AAGTGCAATT AATCGATCTT TGCTCAGGTA TGGTTGTTGG AGTTGCAGCT
TCTTTGATTC CGTTTTTAGA GCACGATGAT GCAAACAGAG CGCTAATGGG TTCAAACATG
CAACGTCAAG CTGTGCCACT TCTTACTGCT TCAGCTCCGA TAGTAGGAAC AGGTATGGAA
CAAATTATTG CGCGTGATGC TTGGGAAGCT GTTAAAGCAA AGCGTGGCGG TGTGGTTGAG
AAAGTGGATA ATAAAAGCAT TTTCATTTTA GGTGAAGATG ATAAAGGTCC ATTTATTGAC
CATTACACTA TGGAGAAAAA TTTAAGAACC AATCAAAATA CAAATTATAT TCAACACCCT
ATTGTTAAAA AAGGTGATAT AGTAAAAGCA GGACAAATTA TCGCAGATGG TCCTTCTATG
GATCAAGGCG AACTTGCTAT AGGTAAAAAT GCTTTAATCG CTTTTATGCC TTGGAATGGT
TATAACTATG AGGATGCTAT AGTTGTAAGT GAGAGAATTA TTCGTGAAGA TACTTTTACA
AGCGTGCACA TTTATGAAAA AGAAATTGAA GCAAGAGAAC TAAAAGACGG TATAGAAGAA
ATTACCAAAG ATATTCCAAA TGTAAAAGAA GAAGATGTTG CGCATCTTGA TGAGAGCGGT
ATTGCAAAAA TTGGTACCCA TATCAAACCA GGTATGATTT TGGTGGGTAA GGTTTCTCCA
AAAGGTGAGG TTAAACCAAC TCCTGAAGAA AGACTTTTAA GAGCGATTTT TGGAGAAAAA
GCAGGACATG TTGTGAATAA ATCCCTTTAT GCAACCGCTT CTTTAGAGGG TGTTGTTGTG
GATGTTAAAA TTTTCACTAA AAAAGGCTAT GAAAAAGATG ATCGCGCAAT AAAATCTTAT
GATAAAGAAA AAATGGCTTT AGAAAAAGAG CATCATGATA GACTTTTGAT GATGGATAGA
GAAGAAATGC TTCGTGTTTG TGCTCTTCTT TCCAAAGCCT CTTTAAATAG CGATCAAAAA
ATTGGAGATA AAAATTATAA AAAAGGACAA ACTGCAGATA TTAGCGAACT TGAAAAAATC
AATCGTTTTA CTTTAACAAC TTTGATTAAA GCTTATTCTA AAGAGATTCA AAAAGAATAC
GATGATTTAA AAAATCATTT CCAAAATGAG AAGAAAAAAT TAAAAGCAGA ACACGATGAA
AAGCTTGAAA TTTTAGAAAA AGATGATATT TTACCAAGTG GGGTAATTAA GCTTGTTAAA
GTTTATATTG CTACAAAAAG AAAGCTTAAA GTCGGTGATA AAATGGCAGG ACGTCATGGA
AATAAAGGTA TAGTTTCAAC TATAGTTCCT GAAGTAGATA TGCCTTATTT GCCAAATGGT
AAGAGTGTGG ATATTGCGCT TAATCCACTT GGCGTTCCAA GTCGTATGAA TATAGGTCAA
ATTTTAGAAA GTCATTTAGG TTTAGTTGGA CTTAGACTTG GGGATCAAAT TCAAGAAATT
TTTGATAGAA AGCAAAAAGA TTTTCTTAAA GAATTAAGAG CGAAAATGCT TGAAATTTGT
TCTATTCCAA GACTTGCAAA CGAAAAAGAA TTTATTAAAA GCTTAAGCGA TGAAGAGCTT
TTAAACTATG CTAGAGACTG GAGTAAAGGA GTTAAATTTT CTACTCCTGT TTTTGAAGGT
GTAAATATAG AAGAATTTAG CAAGCTTTTT AAAATGGCTA AGATAGATAT GGATGGCAAA
ACAGAACTTT ATGATGGACG CACGGGGGAA AAAATTGCAG AGCGTGTTCA TGTAGGATGT
ATGTATATGC TAAAACTCCA TCACTTGGTT GATGAAAAAG TTCATGCAAG AAGTACAGGA
CCTTATAGCT TGGTTACCCA ACAACCTGTG GGTGGTAAAG CACTCTTTGG GGGACAAAGA
TTTGGAGAAA TGGAAGTTTG GGCACTTGAA GCTTATGGAG CGGCTCACAC TTTAAGAGAA
ATGTTAACCA TAAAATCAGA TGATGTAGAA GGTAGATTTA GTGCTTATAA AGCATTGACA
AAAGGTGAAA ATGTTCCAGC AACAGGAATT CCTGAAACAT TTTTTGTATT AACCAATGAG
CTTAAATCTC TTGCTTTAGA TGTTGAGATT TTTGATAAGG ATGAAGATAA TGAGTAA
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| Protein sequence | MCDMLDNKLG NRLRVDFSNI SKQIEIPNLL QLQKKSFDYF LNLDNGESGI EKVFKSIFPI
HDPQNRLSLE YVSSEIGKPK YTIRECMERG LTYSVNLKMK IRLTLHEKDE KTGEKVGVKD
IKEQEIYIRE IPLMTDRVSF IINGVERVVV NQLHRSPGVI FKEEESSTVA NKLVYTAQII
PDRGSWLYFE YDAKDVLYVR INKRRKVPVT MLFRALGYKK QDIIKLFYPI QTIHVKKDKF
LTEFNPNDFM DRIEYDIKDE KGKIVHQAGK RLTKKKAEQL IKDGLKWIEY PVEILLNRYL
ANPIIDKESG EVLFDSLTLL DESKLAKIKE QKSFDIANDL ANGVDAAIIN SFAQDGETLK
LLKQSENIDD ENDLAAIRIY KVMRPGEPVV KDAAKAFVND LFFNPERYDL TKVGRMKMNH
KLGLEVPEYV TVLTNEDIIK TAKYLIKVKN GKGHIDDRDH LGNRRIRSIG ELLANELHLG
LAKMQKAIRD KFTSLNADLD KVMPYDLINP KMITTTIIEF FTGGQLSQFM DQTNPLSEVT
HKRRLSALGE GGLVKERAGF EVRDVHATHY GRICPVETPE GQNIGLINTL STYAKVNELG
FVEAPYRKVV NGKVTNEVVY LTATQEEGLF IAPASTKVDA KGNIVEEFVE ARQDGETILA
RREEVQLIDL CSGMVVGVAA SLIPFLEHDD ANRALMGSNM QRQAVPLLTA SAPIVGTGME
QIIARDAWEA VKAKRGGVVE KVDNKSIFIL GEDDKGPFID HYTMEKNLRT NQNTNYIQHP
IVKKGDIVKA GQIIADGPSM DQGELAIGKN ALIAFMPWNG YNYEDAIVVS ERIIREDTFT
SVHIYEKEIE ARELKDGIEE ITKDIPNVKE EDVAHLDESG IAKIGTHIKP GMILVGKVSP
KGEVKPTPEE RLLRAIFGEK AGHVVNKSLY ATASLEGVVV DVKIFTKKGY EKDDRAIKSY
DKEKMALEKE HHDRLLMMDR EEMLRVCALL SKASLNSDQK IGDKNYKKGQ TADISELEKI
NRFTLTTLIK AYSKEIQKEY DDLKNHFQNE KKKLKAEHDE KLEILEKDDI LPSGVIKLVK
VYIATKRKLK VGDKMAGRHG NKGIVSTIVP EVDMPYLPNG KSVDIALNPL GVPSRMNIGQ
ILESHLGLVG LRLGDQIQEI FDRKQKDFLK ELRAKMLEIC SIPRLANEKE FIKSLSDEEL
LNYARDWSKG VKFSTPVFEG VNIEEFSKLF KMAKIDMDGK TELYDGRTGE KIAERVHVGC
MYMLKLHHLV DEKVHARSTG PYSLVTQQPV GGKALFGGQR FGEMEVWALE AYGAAHTLRE
MLTIKSDDVE GRFSAYKALT KGENVPATGI PETFFVLTNE LKSLALDVEI FDKDEDNE
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