Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0508 |
Symbol | miaB |
ID | 3231269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | - |
Start bp | 460621 |
End bp | 461922 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637291869 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_178526 |
Protein GI | 57237512 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0463062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTGCTA AAAAACTTTT TATCCAAACT TTAGGTTGTG CGATGAATGT TAGAGATTCT GAGCATATGA TCGCAGAATT AACACAAAAA GAAAATTACG CACTAACAGA AGATATCAAA GAAGCAGATC TTATTCTTAT CAATACCTGT TCAGTGCGTG AAAAACCTGT GCATAAACTT TTCTCAGAAG TAGGTGGTTT TGAAAAAGTT AAAAAAGAAG GTGCTAAAAT AGGAGTTTGT GGATGTACTG CATCGCATTT GGGAAATGAA ATTTTCAAAC GTGCTCCTTA TGTGGATTTT GTTCTAGGAG CAAGAAATAT TTCCAAAATC ACTCAAGCTA TAAAAACTCC AAAATTTATG GGCGTGGACA TAGACTATGA TGAAAGTGAA TTTGCTTTTG CAGATTTTAG AAATAGTATT TATAAATCCT ATATTAATAT CTCCATAGGT TGTGATAAAC ACTGCACTTA TTGTATAGTG CCACATACTA GAGGAGATGA AATTTCCATA CCTTTTAACA TTATCTACAA AGAAGCTCAA AAAGCTGTTG AAAAAGGTGC TAAAGAGATT TTTTTGCTAG GACAAAATGT CAATAACTAC GGCAAAAGAT TTAGAAACGA GCATAAAAAA ATGGACTTTT CAGATCTTTT AGAAGAACTT AGCACCATAG AAGATTTAGA ACGCATTCGC TTTACAAGTC CACATCCTTT GCATATGGAT GATAAATTTT TAGAAGTTTT TGCCAATAAT CCAAAAGTTT GCAAATCCAT GCACATGCCT TTACAAAGCG GCTCAAGTGA AATTTTAAAA GCTATGAAGC GTGGCTATAC TAAAGAATGG TATTTAAATA GAGCTTTAAA ACTTAGAGAA CTTTGTCCAA ATGTTAGCAT TTCTACAGAC ATTATTGTAG CTTTTCCAGG GGAAAGTGAA AAAGATTTTG AAGAAACTAT GGATGTTTTG GAAAAAGTGC GTTTTGAACA AATTTTTTCT TTTAAATACT CCAAACGCCC TTTAACAAAA GCCGCAACCA TGCCTAATCA AATCGATGAA GAAACAGCTT CAAGAAGACT TAGCACCTTA CAAAATCGTC ATAGTGAAAT TTTAGATGAA ATTGTAAAAA AACAAGAAAA TAAAACTTTT AAAGTTTTAT TTGAAGAATT AAGAGCAGGC AATAGCATTG CTGGAAGAAC AGATAATAAT TTTTTAGTTC AAGTTGAAGG TAGCGAAGAA CTTTTAGGGC AATTTAAAGA AGTAAAAATA ACTAATGCAA AGCGTATGGT TTTATATGGG GAAATCGTTT AA
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Protein sequence | MSAKKLFIQT LGCAMNVRDS EHMIAELTQK ENYALTEDIK EADLILINTC SVREKPVHKL FSEVGGFEKV KKEGAKIGVC GCTASHLGNE IFKRAPYVDF VLGARNISKI TQAIKTPKFM GVDIDYDESE FAFADFRNSI YKSYINISIG CDKHCTYCIV PHTRGDEISI PFNIIYKEAQ KAVEKGAKEI FLLGQNVNNY GKRFRNEHKK MDFSDLLEEL STIEDLERIR FTSPHPLHMD DKFLEVFANN PKVCKSMHMP LQSGSSEILK AMKRGYTKEW YLNRALKLRE LCPNVSISTD IIVAFPGESE KDFEETMDVL EKVRFEQIFS FKYSKRPLTK AATMPNQIDE ETASRRLSTL QNRHSEILDE IVKKQENKTF KVLFEELRAG NSIAGRTDNN FLVQVEGSEE LLGQFKEVKI TNAKRMVLYG EIV
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