Gene CJE0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJE0454 
SymbolaroE 
ID3231216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni RM1221 
KingdomBacteria 
Replicon accessionNC_003912 
Strand
Start bp407537 
End bp408325 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content29% 
IMG OID637291812 
Productshikimate 5-dehydrogenase 
Protein accessionYP_178473 
Protein GI57237460 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT TAGCAGTTAT AGGCGATCCT ATTTCTCACT CTAAATCGCC TAGAATGCAT 
AATAATGCTA TTAAAGCCTT AGGGCTTGAT AGCATTTATA CACGCTATCA TTTAAGAAAT
GCTAACTGTT TAAGAGAAGA TTTTTTTAAA TTAGGACTTA GTGGAGCTAA TATTACTTTG
CCTTTTAAGG AAAAAGCTTT AGATATTGCT GATGTGAAGG ATGATTTTGC TAGAAATATT
GGCTCTGCAA ATACTTTATG CTTAAAAGAA GATAAAATTT ACGCTTATAA TACTGATGCT
TTAGGTTTTT TAGAAGCTAT TAAGGATTTT GATAATATAA AAAAAGCTTT GATTTTGGGT
GCTGGAGGTA CAGCTTTGGC GCTTGCTTAT GCATTAAAAC AAAAAGGCGT AGAAGTGTAT
ATAGCTAATC GTAGTAAAGA AAGATTTAAA GATTTTTTAG CTTATCCAAC TTATCTTTAT
AAAAACTTGC AAGATTTTGA CTTTGATTTG GTTATAAATT CAACTTCTGC TGGATTAAAA
GATGAAAATT TACCTTGTGA TAGAGAGCTT TTAGATAGAA TTTTACCTAA AGCTAAATTT
GCTTTTGAGG TAATTTATGG CAGAGAAACA CCTTTTTATA GATTATGTAA AGAGTATCAT
TTAAAAATTA AAGATGGACT TGATATGCTT TTATGGCAAG GAGTTTTTGC TTTTGAACTT
TTTTTTGAAA TACAAGATAA AAGAGAGATG ATAAAAAATG CAATGCAACA GGCATTGATT
TTAAAGTAG
 
Protein sequence
MKFLAVIGDP ISHSKSPRMH NNAIKALGLD SIYTRYHLRN ANCLREDFFK LGLSGANITL 
PFKEKALDIA DVKDDFARNI GSANTLCLKE DKIYAYNTDA LGFLEAIKDF DNIKKALILG
AGGTALALAY ALKQKGVEVY IANRSKERFK DFLAYPTYLY KNLQDFDFDL VINSTSAGLK
DENLPCDREL LDRILPKAKF AFEVIYGRET PFYRLCKEYH LKIKDGLDML LWQGVFAFEL
FFEIQDKREM IKNAMQQALI LK