Gene CJE0416 details

Gene Information

• Locus tag: CJE0416
• Symbol: cmeA
• ID: 3231178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: -
• Start bp: 373404
• End bp: 374507
• Gene Length: 1104 bp
• Protein Length: 367 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637291774
• Product: RND efflux system, membrane fusion protein CmeA
• Protein accession: YP_178435
• Protein GI: 57237422
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0845] Membrane-fusion protein
• TIGRFAM ID: [TIGR01730] RND family efflux transporter, MFP subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTAT TTCAAAAAAA TACTATTTTA GCTTTAGGTG TTGTGCTTTT ACTCACTGCT 
TGCAGCAAAG AAGAAGCACC AAAAATACAA ATGCCGCCTC AACCTGTAAC AACCATGAGT 
GCTAAATCTG AAGATTTACC ACTTAGTTTT ACTTACCCTG CTAAACTTGT CAGTGATTAT 
GATGTCATTA TAAAACCTCA AGTTAGTGGC GTAATAGAAA ATAAACTTTT TAAAGCTGGA 
GATAAAGTAA AAAAAGGACA AACATTATTT ATTATAGAAC AAGATAAATT TAAAGCTAGT 
GTTGATTCGG CTTACGGACA AGCTTTGATG GCTAAAGCAA CTTTCGAAAA TGCAAGCAAG 
GATTTTAATC GTTCTAAAGC TCTTTTTAGT AAAAGTGCAA TCTCTCAAAA GGAATACGAC 
TCTTCTCTTG CTACATTTAA CAATTCAAAA GCTAGTCTAG CAAGTGCTAG AGCACAGCTT 
GCAAATGCAA GAATTGATCT AGATCATACC GAAATAAAAG CTCCTTTTGA TGGTACTATA 
GGAGATGCTT TAGTTAATAT AGGAGATTAT GTAAGTGCTT CAACAACTGA ACTAGTTAGA 
GTTACAAATT TAAATCCTAT TTACGCAGAT TTCTTTATTT CAGATACAGA TAAACTAAAT 
TTAGTCCGCA ATACTCAAAG TGGAAAATGG GATTTAGACA GCATTCATGC AAATTTAAAT 
CTTAATGGAG AAACCGTTCA AGGCAAACTT TATTTTATTG ATTCTGTTAT AGATGCTAAT 
AGTGGAACAG TAAAAGCCAA AGCTATATTT GACAACAACA ACTCAACACT TTTACCAGGT 
GCTTTTGCAA CAATTACTTC AGAAGGTTTT ATACAAAAAA ATGGCTTTAA AGTGCCTCAA 
ATAGCTGTTA AACAAAATCA AAATGATGTT TATGTTCTTC TTGTTAAAAA TGGAAAAGTA 
GAAAAATCTT CTGTACATAT AAGCTACCAA AACAATGAAT ATGCCATTAT TGACAAAGGA 
TTGCAAAATG GCGATAAAAT CATTTTAGAT AACTTTAAAA AAATTCAAGT TGGTAGCGAA 
GTTAAAGAAA TTGGAGCACA ATAA 

 

Protein sequence

MKLFQKNTIL ALGVVLLLTA CSKEEAPKIQ MPPQPVTTMS AKSEDLPLSF TYPAKLVSDY 
DVIIKPQVSG VIENKLFKAG DKVKKGQTLF IIEQDKFKAS VDSAYGQALM AKATFENASK 
DFNRSKALFS KSAISQKEYD SSLATFNNSK ASLASARAQL ANARIDLDHT EIKAPFDGTI 
GDALVNIGDY VSASTTELVR VTNLNPIYAD FFISDTDKLN LVRNTQSGKW DLDSIHANLN 
LNGETVQGKL YFIDSVIDAN SGTVKAKAIF DNNNSTLLPG AFATITSEGF IQKNGFKVPQ 
IAVKQNQNDV YVLLVKNGKV EKSSVHISYQ NNEYAIIDKG LQNGDKIILD NFKKIQVGSE 
VKEIGAQ