Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0398 |
Symbol | trpA |
ID | 3231160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 357686 |
End bp | 358435 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637291756 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_178417 |
Protein GI | 57237404 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGATT TTAGAAAATT TTATAAAGAA AATGCAAATG TGGCTTATAC GGTTTTAGGT TATCCAAATC TTCAAACAAG TGAAGCTTTT TTGCAAAGAT TGGATCAAAG CCCTATTGAT ATTTTAGAAC TTGGTGTTGC TTATAGTGAT CCTATTGCCG ATGGTGAGAT TATTGCAGAT GCGGCAAAAA TAGCTCTTGA TCAAGGCGTG GATATTCATA GTGTTTTTGA GCTTTTAGCT AGGATAAAAA CTAAAAAAGC TTTGGTTTTT ATGGTTTATT ATAATTTAAT TTTTTCTTAT GGCTTGGAAA AATTTGTGAA AAAAGCAAAA TCTTTAGGGA TTTGTGCTTT GATTGTGCCT GAATTGAGTT TTGAAGAAAG TGATGATTTA ATTAAAGAGT GTGAAAGATA TAATATAGCT TTAATTACAC TTGTAAGTGT TACAACCCCT AAAGAAAGGG TTAAAAAGTT AGTAAAACAT GCTAAAGGTT TTATTTATTT ATTAGCAAGC ATAGGTATTA CAGGTACGAA AAGTGTCGAA GAAGCAATCT TACAAGATAA AGTAAAAGAA ATCAGATCTT TTACAAATTT GCCTATTTTT GTAGGCTTTG GCATTCAAAA TAATCAAGAT GTAAAAAGAA TGAGAAAAGT TGCTGACGGA GTGATTGTGG GAACTAGCAT AGTAAAGTGT TTTAAACAAG GAAATTTGGA TATAATAATG AAAGATATTG AAGAAATTTT CAAAAAATAA
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Protein sequence | MVDFRKFYKE NANVAYTVLG YPNLQTSEAF LQRLDQSPID ILELGVAYSD PIADGEIIAD AAKIALDQGV DIHSVFELLA RIKTKKALVF MVYYNLIFSY GLEKFVKKAK SLGICALIVP ELSFEESDDL IKECERYNIA LITLVSVTTP KERVKKLVKH AKGFIYLLAS IGITGTKSVE EAILQDKVKE IRSFTNLPIF VGFGIQNNQD VKRMRKVADG VIVGTSIVKC FKQGNLDIIM KDIEEIFKK
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