Gene CJE0327 details

Gene Information

• Locus tag: CJE0327
• Symbol: carB
• ID: 3231089
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: +
• Start bp: 291401
• End bp: 294670
• Gene Length: 3270 bp
• Protein Length: 1089 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637291686
• Product: carbamoyl phosphate synthase large subunit
• Protein accession: YP_178347
• Protein GI: 57237334
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit; [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAAC GAACAGATAT TAAAAGCATT TTACTTATAG GAAGTGGTCC TATTGTGATA 
GGACAAGCTT GTGAATTTGA TTATTCTGGA ACTCAAGCCG CAAAGACTTT AAAAGAATTA 
GGATATCGTG TAGTATTAAT CAACTCAAAT CCTGCAACCA TCATGACAGA TCCCGAATTT 
GCAGATGCGA CTTATATAGA ACCCATAACA AAAGAAAGTA TTTTAAGTAT TATTAAAAAA 
GAAAAAATTG ATGCAATTTT GCCAACTATG GGTGGACAAG TAGCGTTAAA TGTTGCTATG 
GAAGTTTATG AAAGCGGACT TTTAGGAGAT GTGAAATTTT TAGGCGCAAA TCCTGGGGCG 
ATTAAAAAAG GCGAAGATCG TCAGGTTTTT AAAGAATGTA TGAAAAAAAT TGGCATGGAT 
TTGCCAAAAT CGATGTATGC GTATAATTAT GATGAAGCTT TAAAAGCTGT AGATGAAATT 
GGCTTTCCTT TGATGATCCG TGCTTCTTAT ACTTTAGGGG GTGCTGGAAG TGGCGTGGTT 
TACAATATGG ACGAATTTAA AGAACTTGCC AATACTGCTT TAGCTTTATC ACCTATCCAT 
GAAATTTTGA TTGAAGAAAG TTTGTTAGGT TGGAAAGAAT ATGAAATGGA AGTTATACGC 
GATAGAGCGG ATAATTGTAT CATAGTTTGT AGCATAGAAA ATATCGATCC TATGGGAGTT 
CATACAGGAG ATAGTATTAC AATAGCTCCA GCATTAACTT TGACGGATAA AGAATATCAA 
GTTATGCGTA ATGCTTCTTT TGCTATTTTG CGTGAAATTG GCGTAGATAC AGGCGGAAGT 
AATGTGCAGT TTGCTATCAA CCCAAAAAAT GGAAGAATGA TAGTTATAGA AATGAATCCA 
AGAGTTTCAA GATCAAGTGC TTTAGCTTCT AAGGCAACGG GCTATCCTAT AGCAAAGGTT 
GCGACACTTT TGGCAGTAGG CTTTAGTTTA GATGAGATTA AAAATGATAT TACAGGAACT 
CCTGCATCTT TTGAGCCTGT GATTGATTAT ATTGTAACAA AAATTCCTCG CTTTACCTTT 
GAAAAATTTC CAGGAGCAAA TACAACTTTA GGTACAGCTA TGAAAAGTGT GGGTGAGGTG 
ATGGCTATAG GACGCACTTT TAAAGAAAGT ATACAAAAAG TACTTTGTTC GCTTGAGCGT 
TCTTTAAGTG GTTTTGATAG AGTAAAATTT GAAGATAGAA ATGATCTTGT TTTTAAAATT 
CGCAATGCCA ATGAAAAGCG TTTACTTTAT GTTGCTCAAG CTTTTAGGGA AGGTTTTAGC 
GTAGAAGAAC TTTATGAGCT TTGTAAAATA GATCCTTGGT TTTTAACACA GATTAAAGAA 
ATTGTAGATT TTGAAGAGCA AATTGATATG GATATTTTAA ACAATAAAGC TCTTTTGAGA 
AAAGCAAAAA CTATGGGCTT TTCAGACAAA ATGATAGCTT TGCTTGTAAA TTTGAAAGAT 
AATTTAGAAT TAAGCCAAAA TGATATTTAT TATGCAAGAA TGAAGCAAAA AATCATCGCA 
GAATTTAGTG AAGTGGATAC TTGTGCGGGT GAATTTGAAG CTTTAACTCC TTATCTTTAT 
TCAAGTATCA ATGTAAGCGA ACTCACTCAA AGTAAAAACG ATACTAAGGA TAAAAAAGAA 
AAAAAAGTGA TGATTATAGG TGGGGGGCCA AACCGCATAG GACAAGGTAT AGAATTTGAC 
TATGCTTGCG TACATGCTTC TTTTGCGCTT AAAGATATGG GTATTAAAAC TATTATGTAT 
AATTGTAATC CTGAAACCGT TTCGACTGAC TATGATACAA GTGATATTTT GTATTTTGAG 
CCTATTGATT TCGAACATTT AAGAGCGGTG ATTGAGCGTG AAAAACCTGA TGGAGTGATT 
GTGCATTTTG GTGGACAAAC TCCTTTGAAA TTTGCTAAGC GTTTAAGTGC TTTTGGAGCT 
AAGATTATAG GTACTAGCTC AAGAGTAATT GATATGGCAG AAGATAGAAA GAAATTTGCC 
GAATTTATTA CAAAGCTAGG TATCAATCAG CCAAAAAATT CTACTGCAAC AAGCGTAGAA 
GAAGCGGTTC TTAAGGCTAG TGATATAGGG TATCCTGTGC TTGTAAGACC AAGTTATGTT 
TTAGGTGGGC GTGCGATGCG CGTGGTAAAT GATGAGGCTG AACTGAGATT CTATATACAA 
GAAGCTGTGG ATGTAAGCGA TAAAAGCCCT GTTTTGATCG ATCAGTTTTT AGACAATGCT 
ACAGAAATTG ATGTTGATGC GATTTGTGAT GGCAAAGATG TTTATGTTGC AGGAATTATG 
GAGCACATAG AAGAAGCAGG AATTCATTCA GGTGACAGTG CTTGTTCTTT GCCGCCTTGC 
AATATCGATG AAAAAATGCA AGAATTTATT GCACAAAAAA CCGCAGATAT TGCTTTAAAT 
TTGGGAGTTG TAGGGCTTTT AAATATACAA TTTGCTTTAC ATAATAATGA GCTTTATATG 
ATAGAGGTAA ATCCTAGAGC TAGTCGTACC GTACCTTTTG TTAGTAAAGC TATGGGTATT 
CCTTTAGCAA AAGTGGCAAC GCGTGTGATG TGGCAAGGAA ATTTAAAAGA AGCTTTAAAA 
TTTTATGATA CTTTTAAAGT GGTTAATTTT GATACTAAAA TTTTACGCCC TAAAACTCCA 
AAATATATGA GCGTGAAAGA AGCAGTATTT CCATTTGCAA AACTTAGTGG AAGTGATTTA 
GAATTAGGTC CTGAAATGCG TTCAACGGGT GAAGTTATGG GTATAAGCAA GGATTTTGCA 
AATTCTTATG CGAAAAGTCA AATTGCATCG TTTAATCATC TTCCAGAGCA AGGCGTGGTA 
TTTATCTCCT TAAAAGATAA GGATAAAAAA TATACCAAAA AAATCGCTGC AGAATATGTA 
AAGCTTGGCT TTAAGCTTAT GGCAACAGGG GGAACTTGCA AGGAAATTTT AGAAAGCGGT 
TTTGAGTGCG AACTTGTACA TAAAATTTCA GAAGGACGCC CCAATGTTGA AGATAAATTG 
AAAAATGGGG AAATTCACTT AGTTATCAAT ACAAGCGATA GTCACAGTTT TAAAGGCGAT 
ACGAAAAAAA TTCGTGAAAA TATTATTCGT TTTAAAATAC CTTATTTTAC AAATTTACGA 
TCAGCTTTAG CAGGTGCAAA ATCGATTAAA GCTATACAGA GTAAATCTTG CCTAGATGTA 
AAGAGTTTGC AAGAGTGGCT TAAATCTTGA 

 

Protein sequence

MPKRTDIKSI LLIGSGPIVI GQACEFDYSG TQAAKTLKEL GYRVVLINSN PATIMTDPEF 
ADATYIEPIT KESILSIIKK EKIDAILPTM GGQVALNVAM EVYESGLLGD VKFLGANPGA 
IKKGEDRQVF KECMKKIGMD LPKSMYAYNY DEALKAVDEI GFPLMIRASY TLGGAGSGVV 
YNMDEFKELA NTALALSPIH EILIEESLLG WKEYEMEVIR DRADNCIIVC SIENIDPMGV 
HTGDSITIAP ALTLTDKEYQ VMRNASFAIL REIGVDTGGS NVQFAINPKN GRMIVIEMNP 
RVSRSSALAS KATGYPIAKV ATLLAVGFSL DEIKNDITGT PASFEPVIDY IVTKIPRFTF 
EKFPGANTTL GTAMKSVGEV MAIGRTFKES IQKVLCSLER SLSGFDRVKF EDRNDLVFKI 
RNANEKRLLY VAQAFREGFS VEELYELCKI DPWFLTQIKE IVDFEEQIDM DILNNKALLR 
KAKTMGFSDK MIALLVNLKD NLELSQNDIY YARMKQKIIA EFSEVDTCAG EFEALTPYLY 
SSINVSELTQ SKNDTKDKKE KKVMIIGGGP NRIGQGIEFD YACVHASFAL KDMGIKTIMY 
NCNPETVSTD YDTSDILYFE PIDFEHLRAV IEREKPDGVI VHFGGQTPLK FAKRLSAFGA 
KIIGTSSRVI DMAEDRKKFA EFITKLGINQ PKNSTATSVE EAVLKASDIG YPVLVRPSYV 
LGGRAMRVVN DEAELRFYIQ EAVDVSDKSP VLIDQFLDNA TEIDVDAICD GKDVYVAGIM 
EHIEEAGIHS GDSACSLPPC NIDEKMQEFI AQKTADIALN LGVVGLLNIQ FALHNNELYM 
IEVNPRASRT VPFVSKAMGI PLAKVATRVM WQGNLKEALK FYDTFKVVNF DTKILRPKTP 
KYMSVKEAVF PFAKLSGSDL ELGPEMRSTG EVMGISKDFA NSYAKSQIAS FNHLPEQGVV 
FISLKDKDKK YTKKIAAEYV KLGFKLMATG GTCKEILESG FECELVHKIS EGRPNVEDKL 
KNGEIHLVIN TSDSHSFKGD TKKIRENIIR FKIPYFTNLR SALAGAKSIK AIQSKSCLDV 
KSLQEWLKS