Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0197 |
Symbol | |
ID | 3230960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 197273 |
End bp | 199267 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637291559 |
Product | OPT family oligopeptide transporter |
Protein accession | YP_178220 |
Protein GI | 57237208 |
COG category | [S] Function unknown |
COG ID | [COG1297] Predicted membrane protein |
TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily [TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.31085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAAAA AACAAAATTT ACCAGAACTT ACCTTAAGGG GTTTGATTTT GGGAAGTATT TTAACTATTA TTTTTACAGC TTCAAATGTA TATTTGGGGT TAAAAGTGGG ACTTACTTTT TCATCATCAA TTCCAGCTGT GGTCATCTCC ATGGCGGTTT TGAGTCTTTT TAAGACTTCA AATATTTTAG AAAATAATAT GGTTCAAACT CAAGCTTCAG CAGCAGGAAC TTTATCATCA GTTATTTTTG TTATCCCAGG ACTTTTTATG TGTGGGTATT GGAGTGAATT TCCACTTTGG CAAACTTTTA TGATATGTCT TTGTGGTGGC GGACTTGGAG TGCTTTTTAC TATACCATTA AGAAGGACTA TGGTGGTTGA AAGCAAGCTT GCTTATCCTG AAGGTAGAGC TGCAGCTGAA ATTTTAAAAG TAGCCAATAA AGATCAGAGT AGTAAAAAAG GAAAACAAGG CATTAAAGAA ATAGCATTAG GCTCTTTTAT AGCTGCTATT TTTAGTTTGT TAAGCAATGG TTTCAAGCTC GCTGCAAGTG AGAGTAATTT TGCTTTTATT TGGAATAAAA TGGCTTTTGG TTTTTCTATG GGATATTCTT TGGCACTTTT AGGGGCAGGT TATTTAGTTG GTTTAGCAGG TGCTATAGCT CTTTTTGTAG GTATGTTTTT AGCTTGGGGT ATTTTTACTC CCTATCTTTC AAATTTTGAA TTCGATAGTG CAAAAAATGC CGTAGATTTA GCTTCTAGTG TATGGAGTTC TAAAGTAAGG CTTATAGGAA CAGGAGCTAT TGCTATAGCA GCGCTTTGGA CTTTAATAGA ACTTTTAAAA CCCGTTATTG AAGGTATTAA AGAAATTGTT AAAAATGTTA AAATTACTAA TCAAGAAAAA AATGAAAGAA CAAATATAGA CCTTTCTTTA AAAAGTATTT TTATACTTTT TGTTTTAATG GTTGTGGGTT TATTTATTAC TTTTTATAGT TTTGTTGAAG ATGCTAACTT AAGTATTTAT TATCAAATGC TATTTTCATT TGTTGGAACT TTAGTTTCTG TTTTAATAGG TTTTTTTGTT GCAGCAGCTT GCGGATATAT GGCAGGACTT GTAGGATCTT CTTCTAGTCC TATTTCTGGA ATCGGACTTA TTGGTGTTAT TATTTCTTCT ATTGTTTTTT TGGTTTTAGG TGTGGAACTT TTTCAAGATC CTATGCTTTC TAAATTTGCA GTAGCATTAG CTATTTTTAC TACTAGTGTT ATTTTAGCTA CAGCTGCTAT TTCGAATGAT AATTTACAAG ATTTAAAGAC AGGACATTTA GTCGGAGCTA CTCCTTGGAA ACAACAAGTT GCTTTACTTG TAGGCTGTGT TTTTGGTGCT TTGGCTATAG TTCCTGTTTT AAATTTGCTT TATCAAGCCT ATGGTTTTGT CGGAGCAATG CCAAGAGAAG GTATGGATGC TTCATCAGCT TTAGCAGCAC CGCAAGCAAA TTTAATGAGC ACTATCGCCC AAGGAATTTT TCATCACAAT ATAGAGTGGG GTTATATGGC TCTTGGTGTA TTTGTAGGAA TTTTAATGAT TATTATAGAT AAAATTTTAA AAGGAACACA GAAAATGTCT TTGCCGCCTT TAGCCGTTGG AATAGGTATT TACCTTCCCC CTGCTGTAAA TATACCTTTA GTTATAGGCG GAATTTTAAA ATATATTGTA ATGCAACACT TGACTAAAAA GTATGCAAAA AATTCTCATA AAGAAGAAAA ACTTGCAAGT TGTGAGCAAA GAGGCACGCT TTTTGCTTCA GGGCTTATAG TGGGTGAAAG TATTTTTGGG GTAATTATCG CAGGAATTAC TGTATTTTCA GTAAGTATGG GTGGTAGTGA AAATCCTTTA GCTTTAAATT TAGCAAATTT TCATGATAGC GAGCTTTTCG CACTTATCTT TTTTGTGGGA GTTGTATTAT ATTTCATTAA GCGTATTGTT AAAAAAGATG CTTAA
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Protein sequence | MYKKQNLPEL TLRGLILGSI LTIIFTASNV YLGLKVGLTF SSSIPAVVIS MAVLSLFKTS NILENNMVQT QASAAGTLSS VIFVIPGLFM CGYWSEFPLW QTFMICLCGG GLGVLFTIPL RRTMVVESKL AYPEGRAAAE ILKVANKDQS SKKGKQGIKE IALGSFIAAI FSLLSNGFKL AASESNFAFI WNKMAFGFSM GYSLALLGAG YLVGLAGAIA LFVGMFLAWG IFTPYLSNFE FDSAKNAVDL ASSVWSSKVR LIGTGAIAIA ALWTLIELLK PVIEGIKEIV KNVKITNQEK NERTNIDLSL KSIFILFVLM VVGLFITFYS FVEDANLSIY YQMLFSFVGT LVSVLIGFFV AAACGYMAGL VGSSSSPISG IGLIGVIISS IVFLVLGVEL FQDPMLSKFA VALAIFTTSV ILATAAISND NLQDLKTGHL VGATPWKQQV ALLVGCVFGA LAIVPVLNLL YQAYGFVGAM PREGMDASSA LAAPQANLMS TIAQGIFHHN IEWGYMALGV FVGILMIIID KILKGTQKMS LPPLAVGIGI YLPPAVNIPL VIGGILKYIV MQHLTKKYAK NSHKEEKLAS CEQRGTLFAS GLIVGESIFG VIIAGITVFS VSMGGSENPL ALNLANFHDS ELFALIFFVG VVLYFIKRIV KKDA
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