Gene CJE0184 details

Gene Information

• Locus tag: CJE0184
• Symbol: def
• ID: 3230947
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: -
• Start bp: 185000
• End bp: 185527
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 637291547
• Product: peptide deformylase
• Protein accession: YP_178208
• Protein GI: 57237196
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.55747
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAGAA AAATTATCAC CTATCCCAAT CCTAGACTTT TTTTAAACTC TGAAATTGTA 
AATAAATTTG ATACAGAACT TCACACCTTG CTTGATGATA TGTATGAAAC TATGATAGCA 
AGTAATGGAG TAGGTTTAGC AGCTATTCAA GTGGATATTC CTTTGCGTGT TTTACTTGTA 
AATATTTTTG ATGAAAACGA TGAACAAAAA AAAGAAGATT TGCTAGAGAT TATCAATCCT 
GAAATTATTC CTTTAGATGA AGAAATGATC ACTTGCACAG AAGGGTGTTT GAGTGTGCCA 
GATTTTTTTG AAGAAGTGAA ACGCTATAAT CATATCTTGC TTAAATATCA AGATCGCTTT 
GGAGAATTTA AAGAACTTGA AGCAAAAGGT TTTTTAGCTG TGGCTATTCA ACACGAAAAT 
GATCATTTAA ATGGACATTT ATTTATAGAA AAAATTTCCT TTGCTAAGCG TCAAAAATTC 
GATAAAGAAT TTAAGAAAAA GAAGAAAAAT CATAAAAAAG AGAAATGA 

 

Protein sequence

MVRKIITYPN PRLFLNSEIV NKFDTELHTL LDDMYETMIA SNGVGLAAIQ VDIPLRVLLV 
NIFDENDEQK KEDLLEIINP EIIPLDEEMI TCTEGCLSVP DFFEEVKRYN HILLKYQDRF 
GEFKELEAKG FLAVAIQHEN DHLNGHLFIE KISFAKRQKF DKEFKKKKKN HKKEK