Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0175 |
Symbol | |
ID | 3230938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 176030 |
End bp | 177229 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637291538 |
Product | putative transporter |
Protein accession | YP_178199 |
Protein GI | 57237187 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1133] ABC-type long-chain fatty acid transport system, fused permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.294554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTCTT CGTTTTTTAA AAGTAAAAAA TGGGCTTTAT GGGCTTATTT GGGACTTTTT TTACTGTTAT TTTTCTTATA TATACAAACA AGCTTAAATG TTGCGATCAA TTCATGGTAT AGTGATTTTT ACAATGTTTT ACAAAAGCCA AAAATAGAAC TTTTGGATTC TAATTCTACG CAAAAAATAG AAGAAAATCT TGAAAATAAT GCCACTTTAA TCCAAGAGGC TAATCAAAGA GCTGAGCAAA ATTTCCAAAA AGCTAATTTT ATCAATAAAG GTGCATTGTA TTATTATCAA AATTTATTAG AATATTTTTT CAACTCTAGG GCTATGATTG AAAAGCCAAA TTATTCAGCA AGTGATTTTT ATGCTTTGAT TTTAGTTTTT TTGGCTATTG CTATTCCTTA TGTTTTAATC GCTACAATTA ATATCTATTT TGCTAGCGTC TATGCTTTTA AGTGGCGTGA GGCTATGACT TTTTCTTATT TAAAATTTTG GAAAAATAAA GATGATAATA TAGAAGGAAG TTCGCAAAGA ATTCAAGAAG ATACTTATAA TTTTTCTAAA ATCGTAGAGA GTTTAGGACT TAGTTTTATA AAAGCTTTGA TGACCCTTGT AGCATTTATT CCGATTTTAT GGAGTTTAAG TGATGTTGTG AGTAAAGCTT TATTTGCAAA TTTAAGCGAA AATTCTTCTT TTTATTTTTT AAAAAACATT GATGGTTTGC TTGTTTATAT TGCACTTTTG ATTTCTTTAG GAGGCTTGGT TGTGTCATGG TTTGTAGGTA TTAAGCTTCC TGGACTTGAA TATAACAATC AAAAAGCTGA AGCAGCTTTT AGAAAAGAGC TTGTTTATGC TGAGGATAAT CGCAAAGAAT ACGCTAAAAA TGAGACTATG ATAGAGCTTT TTACAGGGCT TAAATTTAAC TATAAAAGAC TTTTTTTACA TTATGGATAT TTTAATATTT GGCTCATTTT ATTTGAGCAA ATGATAGTTA TAGTGCCATT TTTAATCATA GCACCAGGGC TTTTTGCTGG AGCTATAGGA CTTGGTATTG TAATGCAGAT TAATAATGCA TTTGATCAAG TGCGAAGCTC TTTTAGTGTT TTTATCACAA ACTGGACAAC TATCACTCAA CTTAGAAGTA TATATAAGCG TTTAAAAGAA TTTGAGAAAA ATATTTCTTA TAAGTCTTAG
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Protein sequence | MFSSFFKSKK WALWAYLGLF LLLFFLYIQT SLNVAINSWY SDFYNVLQKP KIELLDSNST QKIEENLENN ATLIQEANQR AEQNFQKANF INKGALYYYQ NLLEYFFNSR AMIEKPNYSA SDFYALILVF LAIAIPYVLI ATINIYFASV YAFKWREAMT FSYLKFWKNK DDNIEGSSQR IQEDTYNFSK IVESLGLSFI KALMTLVAFI PILWSLSDVV SKALFANLSE NSSFYFLKNI DGLLVYIALL ISLGGLVVSW FVGIKLPGLE YNNQKAEAAF RKELVYAEDN RKEYAKNETM IELFTGLKFN YKRLFLHYGY FNIWLILFEQ MIVIVPFLII APGLFAGAIG LGIVMQINNA FDQVRSSFSV FITNWTTITQ LRSIYKRLKE FEKNISYKS
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