| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE0171 |
|---|
| Symbol | |
|---|
| ID | 3230934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | + |
|---|
| Start bp | 171793 |
|---|
| End bp | 174060 |
|---|
| Gene Length | 2268 bp |
|---|
| Protein Length | 755 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637291534 |
|---|
| Product | TonB-dependent colicin receptor protein, putative |
|---|
| Protein accession | YP_178195 |
|---|
| Protein GI | 57237183 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAAGTTTATT TTGTGCTGTA GGTTTATGTT TTGCTAGTTT TGCTTTTTCT
GAAGAATTAG AATTTGATAG TCTTGAAATT TCAGGTTCAA AAATCAAAAA CGATGAAAAA
CCTTTTGTAA CTCCTGGAGC AACAAGCACA AGAGAGGATA TAGGTTCAGA TACACAAAGT
ATAGATTCTA TAGTGCGTAG TATACCTGGA ACCTACACAA ACACAGATCA AGCTCAAGGT
ACAGTTCAAG TAAATATTCG TGGTATGAGT GGTTTTGGGC GTGTTAATAC CATGATTGAC
GGTGTTACTC AAACTTTTTA TGGTAGTGCA TCAGATGATC CAGCTAGATT TCATTCACAA
ACGGGAACTT CAGCTTTTGG AGCTGTTATT GATACAAATT TCTTAATCGG AGTTGATGTT
ACAAGGGGAA CTTTTGAAGG AGTAGGTGAA GCAAATGCCT TGATGGGATC AGCAAATTTT
AAGACCATAG GTATAAATGA TATTGTACAT GATGGCAATA TCTTTGGATT TTTAGGACGA
TTTTCTTATG GAAGCAATGG AATCGGACCA AGTTATATGA GTGCAGTGGC TGGAAAGACT
GAACTTGAAA ATAATGGATA TGTGGGCGCG CTTTTTGGTT ATAGCGCAAA GAGAATTACT
CAAAATTACA CTGTAGGCGG GGGTGGCAAG ATAGGTAGTA GTATGGTTGA TACTGATGGA
GATGGTATAG CTGATACCAA TATCGCTCCT TTTGATCCAG ATTTTTTAAC CCAAAAACCA
AACTCTCAAC TTTTTAAACT CGAATATGTC CCAAATTCTT TTACAAACAC TATATTTTCT
TATCGTAGAT ATCAAAACGA ACTTGCCGGT AGAAAAATAC ACAATGACAA TTATCAACTT
GATTTTTGGC ACAACCCTAA TGAGTGGCTT AATGTAAATA CGCTTATTGC CTACAATCAA
GGCATACAAA CCTATGGATC AAAATCTACT TTTGCGGCAA ACGATGCCAT AGCTAACACA
AAGGCAAAAA ATACTGCCAC TACTTTTGAT ATAAGTGATA CTTTAGAGGG TGAATGGCAT
GGATTTAATC TAAACACACG CTTTGGAGCA AATATTTTGC TTAATGATTA TAAAAATACC
TTAAATACAT CAATTCAAGG AGTAAATTCT ATACCTTTTC AGCCTCGTGG AAAACAAAAT
CTTTTTACTT ATTATCTTGA TAATAGTCTA AATTATGGTA TCTTTACACT TGATACCAAT
GTGAATCTTT TAGATTGGAA TATCAAAGGA CACAGACCTG CTTGCGATGA AGTAAATTTT
ATGTGTTTTC CAAAAGCGGC GACAGATATA GATAAAAATG GACTTCGCCT GAATGCTTCT
GTCATGCTTT CAGCTGCCAT ACACGAGCTT TTTACACCCT TTGTAAGTTT TGCGAGAACA
AATAGAGCCC CTAATGTGCA AGAAATGTTT TTCTCAAATA ACGAAGGCAA TGGTATCAAT
CCTTTCTTAA AACCAGAACA AGCCAATACT TGGCAAATAG GTTTTAATTC TTTTAAACAT
GGACTTTTAA AAGATGATGA TCGCTTTGGT TTTAAAGCCG TGTATTATCA TACAAAAATA
AAAGATTATA TTTATAATGA ACAATTTTAT CTTGAAGATC CAAGTAAAGA TCCTCCAAGC
TCGCAATTTT ATATGCACTT AAATTCAGCT GATGATACCA TATTTAAGGG TGTGGAGTTA
GAATTAAGCT ATGACTTGGG TTTTGCTTAT GCTAAAGCTA TGTATTCAAG ACAAGATACA
AGTTCGACTA TTTCTCAAAC TTCAGGACCT CTTCTTGGCT CTTTTTCGGC AAGTAAAATC
ATGGAGCTTC CAAAAGATTA TGCAAATGTA GAGCTTGGCT TTAGGTTAAA TGATAAAATA
AGCTTTGGTG GTATAGCAAA ATACACAGGC AAAGCAAAAA GGGTAAATCC AAATACAGAT
GATTGGAATA AGGATCCAAA CAATCCTTAT TATCCTAAAC CAACCACACA AGACTTACCA
AAAATTCCTA TTATAGTAGA TTTATATTGG AATATAGAAT GGTTTAAAAA CCTCACAATG
AGAGCAGAGG TGCAAAATTT ATTTGATAAA AACTACATGG ATGCCTTAAA TGCTTATAAT
TCCTTAGATA ATCAGCTTCA ATATAATGGA GCAGGTGATC CTATCTATCT TTTTAGCAAT
TCTGCTCGTG GTCGCACCTT TGTAGTAAGT TTTGAATATA AATATTAA
|
|---|
| Protein sequence | MKKLSLFCAV GLCFASFAFS EELEFDSLEI SGSKIKNDEK PFVTPGATST REDIGSDTQS
IDSIVRSIPG TYTNTDQAQG TVQVNIRGMS GFGRVNTMID GVTQTFYGSA SDDPARFHSQ
TGTSAFGAVI DTNFLIGVDV TRGTFEGVGE ANALMGSANF KTIGINDIVH DGNIFGFLGR
FSYGSNGIGP SYMSAVAGKT ELENNGYVGA LFGYSAKRIT QNYTVGGGGK IGSSMVDTDG
DGIADTNIAP FDPDFLTQKP NSQLFKLEYV PNSFTNTIFS YRRYQNELAG RKIHNDNYQL
DFWHNPNEWL NVNTLIAYNQ GIQTYGSKST FAANDAIANT KAKNTATTFD ISDTLEGEWH
GFNLNTRFGA NILLNDYKNT LNTSIQGVNS IPFQPRGKQN LFTYYLDNSL NYGIFTLDTN
VNLLDWNIKG HRPACDEVNF MCFPKAATDI DKNGLRLNAS VMLSAAIHEL FTPFVSFART
NRAPNVQEMF FSNNEGNGIN PFLKPEQANT WQIGFNSFKH GLLKDDDRFG FKAVYYHTKI
KDYIYNEQFY LEDPSKDPPS SQFYMHLNSA DDTIFKGVEL ELSYDLGFAY AKAMYSRQDT
SSTISQTSGP LLGSFSASKI MELPKDYANV ELGFRLNDKI SFGGIAKYTG KAKRVNPNTD
DWNKDPNNPY YPKPTTQDLP KIPIIVDLYW NIEWFKNLTM RAEVQNLFDK NYMDALNAYN
SLDNQLQYNG AGDPIYLFSN SARGRTFVVS FEYKY
|
|---|
| |